| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 1010158 = | 60 (0.740) | 4 (0.060) | 3/84 | NT | 7.9% | coding (1893/2109 nt) | ycbY | predicted methyltransferase |
| ? | AP009048 | 1010181 = | 42 (0.600) | coding (1916/2109 nt) | ycbY | predicted methyltransferase | |||||
CGAGAACATGATCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1010230‑1010158‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgaTGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGTGGCTTCCG > AP009048/1010181‑1010250 CGAGAACATGATCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCT > 1:82019/1‑71CGAGAACATGATCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCT > 1:7501433/1‑71 GAGAACATGATCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTG < 1:1146576/71‑1 GAGAACATGATCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTG < 1:2765047/71‑1 GAGAACATGATCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCT < 1:511860/70‑1 GAGAACATGATCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCT < 1:3293984/70‑1 TGATCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGC > 1:924924/1‑62 TGATCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGC > 1:7712649/1‑62 TCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTGA > 1:7693307/1‑62 TCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTGA > 1:6670445/1‑62 CTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTG < 1:1037790/52‑1 CTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTG < 1:5089455/52‑1 CTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTG < 1:5098296/52‑1 AGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTG > 1:1362414/1‑44 GCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTG < 1:4704832/43‑1 GCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTG < 1:5181609/43‑1 GCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTG < 1:6774975/43‑1 ATCTTTCATCAGCGCCAGATGATCGCGCTGATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGAC > 1:2609112/1‑68 ATCAGCGCCAGATGATCGCGCTGATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTC > 1:543777/1‑71 CAGCGCCAGATGATCGCGCTGATGAAAGATTTGAAACGTCTGCTGCGTGCAG > 1:567325/1‑52 CAGCGCCAGATGATCGCGCTGATGAAAGATTTGAAACGTCTGCTGCGTGCAG > 1:5812163/1‑52 GCGCTGATGGAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAAC < 1:6926231/67‑1 GCGCTGATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGT < 1:6295714/69‑1 GCGCTGATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGT < 1:180916/69‑1 GCGCTGATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAAC < 1:5645053/67‑1 CTGATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGTGGCTT > 1:4306113/1‑71 TGATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGTGGCTTC > 1:7308398/1‑71 ATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGTGGCTTCCG > 1:1652317/1‑71 ATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGTGGCTTCCG > 1:6023000/1‑71 ATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGTGGCTTCCG > 1:2869116/1‑71 CGAGAACATGATCGTCCCACCTGCACGCAGCAGACGTTTCAAATCTTTCATCAGCGCCAGATGATCGCGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1010230‑1010158‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgaTGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGTGGCTTCCG > AP009048/1010181‑1010250 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |