| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 1299486 = | 59 (0.720) | 4 (0.060) | 3/86 | NT | 6.8% | coding (213/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase and iron‑dependent alcohol dehydrogenase and pyruvate‑formate lyase deactivase |
| ? | AP009048 | 1299507 = | 58 (0.810) | coding (192/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase and iron‑dependent alcohol dehydrogenase and pyruvate‑formate lyase deactivase | |||||
AATCCCACTCGCGAAAATGGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1299561‑1299486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactttATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTCGCGAGTGGGATTCGAGCATCTGC > AP009048/1299507‑1299572 AATCCCACTCGCGAAAATGGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACC < 1:480367/71‑1 ATCCCACTCGCGAAAATGGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCA > 1:2363532/1‑71 ACTCGCGAAAATGGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCAC < 1:6457532/67‑1 ACTCGCGAAAATGGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCAC < 1:5655500/67‑1 CGCGAAAATGGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACTTTcc > 1:2130160/1‑67 GGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACT < 1:6477184/56‑1 GGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACT < 1:2511409/56‑1 GGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACT < 1:2919161/56‑1 CCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACTTT > 1:1089716/1‑56 TGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCA > 1:1838834/1‑48 ATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACC < 1:1786633/41‑1 CCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCAC > 1:593479/1‑41 CCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCAC > 1:2535817/1‑41 GCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACT < 1:7329518/39‑1 GCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACT < 1:5527994/39‑1 GATAAAGTGATCAAAAACCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAA < 1:3528323/56‑1 TAAAGTGATCAAAAACCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACG > 1:2320010/1‑56 TAAAGTGATCAAAAACCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACG > 1:6838849/1‑56 AGTGATCAAAAACCACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTCGC > 1:1656033/1‑64 ACTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTCGCGAGTGGGATTCGAGCATCTGC < 1:2325339/71‑1 CTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTCGCGAGTGGGATTCGAGCATCTG > 1:3244395/1‑69 CTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCC > 1:2991792/1‑41 CTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCC > 1:6749703/1‑41 CTTTATCTTCGACGATACCCATGCCGGATTCGGCAACGGCC > 1:1431266/1‑41 AATCCCACTCGCGAAAATGGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1299561‑1299486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactttATCTTCGACGATACCCATGCCGGATTCGGCAACGGCCATTTTCGCGAGTGGGATTCGAGCATCTGC > AP009048/1299507‑1299572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |