| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 1629069 = | 70 (0.860) | 4 (0.050) | 3/90 | NT | 5.3% | coding (26/2046 nt) | dcp | dipeptidyl carboxypeptidase II |
| ? | AP009048 | 1629089 = | 78 (1.040) | coding (6/2046 nt) | dcp | dipeptidyl carboxypeptidase II | |||||
TTATCAGTAAGCCTACGCTATGGAACACCTCGCGTTCAGGAGAAGAAAATGACAACAATGAATCCTTTCCTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1629142‑1629069‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgtTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGC > AP009048/1629089‑1629158 TTATCAGTAAGCCTACGCTATGGAACACCTCGCGTTCAGGAGAAGAAAATGACAACAATGAATCCTTTCCT > 1:7728675/1‑71TTATCAGTAAGCCTACGCTATGGAACACCTCGCGTTCAGGAGAAGAAAATGACAACAATGAATCCTTTCCT > 1:7228069/1‑71 TATCAGTAAGCCTACGCTATGGAACACCTCGCGTTCAGGAGAAGAAAATGACAACAATGAATCCTTTCCTT > 1:1552773/1‑71 ATCAGTAAGCCTACGCTATGGAACACCTCGCGTTCAGGAGAAGAAAATGACAACAATGAATCCTTTCCTTG > 1:301637/1‑71 ATCAGTAAGCCTACGCTATGGAACACCTCGCGTTCAGGAGAAGAAAATGACAACAATGAATCCTTTCCTT < 1:5401286/70‑1 CAGTAAGCCTACGCTATGGAACACCTCGCGTTCAGGAGAAGAAAATGACAACAATGAATCCTTTCCTTGT < 1:1165724/70‑1 ATGGAACACCTCGCGTTCAGGAGAAGAAAATGACATCAATGAATCCTTTCCTT > 1:2756797/1‑53 ATGGAACACCTCGCGTTCAGGAGAAGAAAATGACAACAATGAATCCTTTCCTT > 1:3876699/1‑53 CGCGTTCAGGAGAAGAAAATGACAACAATGAATCCTTTCCT > 1:3172130/1‑41 GGAGAAGAAAATGACAACAATGAATCCTTTCCTTGT > 1:4150711/1‑36 ACAATGAATCCTTTCCTTGTTGTCATTTTCTTCTCCTG < 1:2242536/38‑1 ACAATGAATCCTTTCCTTGTTGTCATTTTCTTCTCCTG < 1:506048/38‑1 CAATGAATCCTTTCCTTGTTGTCATTTTCTTCTCCTGAACGCGAG > 1:4661874/1‑45 AATGAATCCTTTCCATGTTGTCATTTTCTTCTCCTGAA > 1:2370899/1‑38 TGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGT > 1:4708024/1‑63 GTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTG > 1:5256846/1‑71 GTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTT < 1:6171580/70‑1 GTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGT > 1:7163497/1‑42 TTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGC < 1:6544240/71‑1 TTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTG < 1:7811490/70‑1 TTATCAGTAAGCCTACGCTATGGAACACCTCGCGTTCAGGAGAAGAAAATGACAACAATGAATCCTTTCCTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1629142‑1629069‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgtTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGC > AP009048/1629089‑1629158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |