| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 1874574 = | 68 (0.840) | 7 (0.100) | 4/86 | NT | 10.4% | coding (820/1491 nt) | yeaJ | predicted diguanylate cyclase |
| ? | AP009048 | 1874601 = | 61 (0.850) | coding (847/1491 nt) | yeaJ | predicted diguanylate cyclase | |||||
ACGAATGCCGCCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGATAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1874648‑1874574‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gataatCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGATATTC > AP009048/1874601‑1874670 ACGAATGCCGCCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGA > 1:6386856/1‑71ACGAATGCCGCCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGA < 1:4393395/71‑1ACGAATGCCGCCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGA < 1:3491312/71‑1ACGAATGCCGCCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGA < 1:3109183/71‑1 CGAATGCCGCCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGAT < 1:7431862/71‑1 GAATGCCGCCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGAT > 1:2129/1‑70 ATGCCGCCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGATAAT < 1:499227/71‑1 ATGCCGCCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGATAAT < 1:1935968/71‑1 CCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGATAAT < 1:17619/65‑1 CCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATG > 1:1148014/1‑59 CCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATG > 1:1581673/1‑59 ACATACTGGAACAGATTATCTTCGCTCTGGTTGATGA > 1:6196920/1‑37 ACATACTGGAACAGATTATCTTCGCTCTGGTTGATGA > 1:7374538/1‑37 TACTGGAACAGATTATCTTCGCTCTGGTTGATGAT < 1:4598468/35‑1 CTGGAACAGATTATCTTCGCTCTGGTTGATGATAA > 1:2279376/1‑35 AGATTATCTTCGCTCTGGTTGATGATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTAC < 1:3884266/63‑1 AGATTATCTTCGCTCTGGTTGATGATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTAC < 1:1141427/63‑1 ATTATCTTCGCTCTGGTTGATGATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGG < 1:4236706/68‑1 ATTATCTTCGCTCTGGTTGATGATAATCTGTTCCAGTATGTCAGTTACGTCCATGA < 1:7089249/56‑1 ATTATCTTCGCTCTGGTTGATGATAATCTGTTCCAGTATGTCAGTTACGTCCATGA < 1:3991479/56‑1 TATCTTCGCTCTGGTTGATGATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTC > 1:135764/1‑71 TATCTTCGCTCTGGTTGATGATAATCTGTTCCAGTATGTCAGTTACGTCCATGACT > 1:3302791/1‑56 GATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGA > 1:2287337/1‑71 GATAATCTGTTCCAGTATGTCAGTTACGTCCATGA < 1:6415805/35‑1 GATAATCTGTTCCAGTATGTCAGTTACGTCCATGA < 1:7766897/35‑1 ATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCg > 1:1619364/1‑65 ATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCA > 1:4014987/1‑66 ATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCA > 1:431401/1‑66 ttATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTC < 1:2375928/48‑1 TAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGATA > 1:6716460/1‑71 AATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGATAT > 1:7755324/1‑71 AATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGATA > 1:6665571/1‑70 AATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTT > 1:2053022/1‑59 AATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGT > 1:872931/1‑53 AATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGG < 1:2406777/41‑1 ATCTGTTCCAGTATGTCAGTTACGGCCATGACTTACCGGGCGGCATTCGTGTCTCGATATCCATTGATAT < 1:6491705/70‑1 TCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGATATTC > 1:5375294/1‑71 TCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGATATTC > 1:1426204/1‑71 ACGAATGCCGCCCGGTAAGTCATGGACGTAACTGACATACTGGAACAGATTATCTTCGCTCTGGTTGATGATAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1874648‑1874574‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gataatCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGATATTC > AP009048/1874601‑1874670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |