| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 1900342 = | 100 (1.230) | 9 (0.120) | 3/90 | NT | 9.9% | coding (202/1599 nt) | yoaD | predicted phosphodiesterase |
| ? | AP009048 | 1900362 = | 72 (0.960) | coding (222/1599 nt) | yoaD | predicted phosphodiesterase | |||||
TTGCCGCCTGTTTACGTAATGGCAAATGGGCGACAGAGCAGGGCAGACCAATCAGCGGAAGCAAGACTTCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1900414‑1900342‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCGGCAAAACTCCAAACTGTGCG > AP009048/1900362‑1900430 TTGCCGCCTGTTTACGTAATGGCAAATGGGCGACAGAGCAGGGCAGACCAATCAGCGGAAGCAAGACTTC > 1:5097800/1‑70 CCGCCTGTTTACGTAATGGCAAATGGGCGACAGAGCAGGGCAGACCAATCAGCGGAAGCAAGACTTCGCT < 1:1490536/70‑1 TACGTAATGGCAAATGGGCGACAGAGCAGGGCAGACCAATCAGCGGAAGCAAGACTTCGCT > 1:3972212/1‑61 AAATGGGCGACAGAGCAGGGCAGACCAATCAGCGGAAGCAAGACTTCGCT > 1:364740/1‑50 ATGGGCGACAGAGCAGGGCAGACCAATCAGCGGAAGCAAGACTTCGC < 1:4043458/47‑1 TCAGCGGAAGCAAGACTTCGCTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCG > 1:4203866/1‑71 TCAGCGGAAGCAAGACTTCGCTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCG > 1:4727357/1‑71 TCAGCGGAAGCAAGACTTCGCTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCG > 1:2026773/1‑71 AGCGGAAGCAAGACTTCGCTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCGG > 1:248810/1‑70 GCGGAAGCAAGACTTCGCTGATTGGTCTGCCCTGCTCTGTCGCCCAT < 1:2338455/47‑1 GCGGAAGCAAGACTTCGCTGATTGGTCTGCCCTGCTCTGTCGCCCAT < 1:2355990/47‑1 GCGGAAGCAAGACTTCGCTGATTGGTCTGCCCTGCTCTGTCGCCCAT < 1:4067544/47‑1 GCGGAAGCAAGACTTCGCTGATTGGTCTGCCCTGCTCTGTCGCCCAT < 1:6613214/47‑1 GCGGAAGCAAGACTTCGCTGATTGGTCTGCCCTGCTCTGTCGCCCAT < 1:898190/47‑1 CGCTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCGGCAAAACTCCAAACTGT > 1:702696/1‑70 CTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCGGCAAAACTCCAAACTGTGCG < 1:2472001/71‑1 CTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCGGCAAAACTCCAA > 1:3876391/1‑63 CTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTA < 1:1199802/43‑1 TTGCCGCCTGTTTACGTAATGGCAAATGGGCGACAGAGCAGGGCAGACCAATCAGCGGAAGCAAGACTTCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1900414‑1900342‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCGGCAAAACTCCAAACTGTGCG > AP009048/1900362‑1900430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |