New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AP009048 = 217863359 (0.720)4 (0.060) 3/86 NT 6.9% coding (1023/1263 nt) gatZ D‑tagatose 1,6‑bisphosphate aldolase 2, subunit
?AP009048 = 2178648 57 (0.800)coding (1008/1263 nt) gatZ D‑tagatose 1,6‑bisphosphate aldolase 2, subunit

CATCATCGTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AP009048/2178558‑2178633
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taacgaTTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGGCCGCATAGTCGGATTAAA  <  AP009048/2178648‑2178579
                                                                                                                                                  
CATCATCGTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGT                                                                             <  1:6417868/71‑1
CATCATCGTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGT                                                                             <  1:498511/71‑1
 ATCATCGTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGT                                                                             >  1:263085/1‑70
  TCATCGTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAA                                                                           >  1:3220438/1‑71
    ATCGTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAAC                                                                          <  1:1496040/70‑1
     TCGTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAACGA                                                                        <  1:7304187/71‑1
     TCGTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAACG                                                                         <  1:4516243/70‑1
     TCGTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTA                                                                            <  1:4613022/67‑1
       GTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAAC                                                                          >  1:2905207/1‑67
                CTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAACGA                                                                        <  1:1653337/60‑1
                         ATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAACGATTCATTACTGGATATTCGTT                                                    <  1:4723223/71‑1
                         ATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAACGATTCATTACTGGATATTCGTT                                                    <  1:3086458/71‑1
                          TCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAACGATTCATTACTGGATATTCGTTA                                                   <  1:326470/71‑1
                                     GGCCAGTAATAACGAATACGATCCGACAGGCTGTAACGATTCATTACTGGATATTCG                                                      <  1:2619809/57‑1
                                       CCAGTAATAACGAATACGATCCGACAGGCTGTAACG                                                                         <  1:5636158/36‑1
                                                                      TAACGATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGGCCGCATAGTCGGA       >  1:2909488/1‑71
                                                                      TAACGATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACT                      <  1:5919718/56‑1
                                                                       AACGATTCATTACTGGATATTCGTTACAGCCTGTCGGATCG                                    <  1:7597631/41‑1
                                                                       AACGATTCATTACTGGATATTCGTTACAGCCTGTCGGATCG                                    <  1:823692/41‑1
                                                                        ACGATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGG                    >  1:2001194/1‑56
                                                                         CGATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGGCCGCATAGTCGGATTA    <  1:7261299/71‑1
                                                                          GATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGGCCGCATAGTCGGATTA    <  1:4901855/70‑1
                                                                          GATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGGCCGCATAGTCG         <  1:7447467/65‑1
                                                                           ATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGGCCGCATAGTCGGATTAAA  <  1:5143906/71‑1
                                                                           ATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGGCCGCATAGTCGGATTAAA  <  1:5929336/71‑1
                                                                           ATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTC                               >  1:5154272/1‑42
                                                                           ATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTC                               >  1:5547088/1‑42
                                                                           ATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATT                                >  1:3467282/1‑41
                                                                           ATTCATTACTGGATATTCGTTACAGCCTGTCGGAT                                      >  1:2880200/1‑35
                                                                                                                                                  
CATCATCGTTTCGACGCTATTTTTAATCCGACTATGCGGCCAGTAATAACGAATACGATCCGACAGGCTGTAACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AP009048/2178558‑2178633
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taacgaTTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGGCCGCATAGTCGGATTAAA  <  AP009048/2178648‑2178579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.