| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2418819 = | 94 (1.150) | 10 (0.130) | 3/94 | NT | 9.6% | intergenic (‑241/‑97) | yfbV/ackA | conserved inner membrane protein/acetate kinase A and propionate kinase 2 |
| ? | AP009048 | 2418861 = | 98 (1.250) | intergenic (‑283/‑55) | yfbV/ackA | conserved inner membrane protein/acetate kinase A and propionate kinase 2 | |||||
CTAAAAAAACGTCAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2418890‑2418819‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGT > AP009048/2418861‑2418928 CTAAAAAAACGTCAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCAC < 1:3758519/71‑1CTAAAAAAACGTCAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCAC < 1:4285921/71‑1 TAAAAAAACGTCAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT > 1:3522826/1‑71 AAAAAACGTCAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT < 1:81046/69‑1 ACGTCAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT < 1:2138480/64‑1 ACGTCAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT < 1:4238986/64‑1 ACGTCAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT < 1:5448414/64‑1 CAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT > 1:1756853/1‑60 CAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT > 1:759085/1‑60 CAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT > 1:3767394/1‑60 CAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT > 1:4101318/1‑60 CAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT > 1:7199492/1‑60 AGCGCATGATGACACCGACATTTATGATTAACATCATGCACTACGCTCTATGGCTCCCTG < 1:2033621/60‑1 AGCGCATGATGACACCGACATTTATGATTAACATCATGCACTACGCTCTATGGCTCCCTG < 1:7813157/60‑1 AGCGCATGATGACACCGACATTTATGATTAACATCATGCACTACGCTCTATGGCTCCCTG < 1:6759855/60‑1 AGCGCATGATGACACCGACATTTATGATTAACATCATGCACTACGCTCTATGGCTCCCTG < 1:5754842/60‑1 GCGCATGATGACACCGACATTTATGATTAACATCATGCACTACGCTCTATGGCTCCCTGACGT < 1:4481799/63‑1 GCGCATGATGACACCGACATTTATGATTAACATCATGCACTACGCTCTATGGCTCCCTGACGT < 1:2080849/63‑1 GCATGATGACACCGACATTTATGATTAACATCATGCACTACGCTCTATGGCTCCCTGACGTTT > 1:5833446/1‑63 GCATGATGACACCGACATTTATGATTAACATCATGCACTACGCTCTATGGCTCCCTGACGTTT > 1:5140543/1‑63 GCATGATGACACCGACATTTATGATTAACATCATGCACTACGCTCTATGGCTCCCTGACGTTT > 1:356927/1‑63 GCATGATGACACCGACATTTATGATTAACATCATGCACTACGCTCTATGGCTCCCTGACGTTT > 1:277445/1‑63 TACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGT > 1:6944076/1‑69 TACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGT > 1:7829989/1‑69 TACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGT > 1:7559860/1‑60 CTAAAAAAACGTCAGGGAGCCATAGAGCGTAGCGCATGATGACACCGACATTTATGATTAACATCATGCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2418890‑2418819‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGT > AP009048/2418861‑2418928 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |