| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2572129 = | 51 (0.630) | 6 (0.080) | 3/88 | NT | 10.3% | coding (33/1017 nt) | eutI | predicted phosphotransacetylase subunit |
| ? | AP009048 | 2572182 = | 59 (0.810) | coding (780/804 nt) | eutT | predicted cobalamin adenosyltransferase in ethanolamine utilization | |||||
GCTAACGGTGAAGCAGATCCAACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2572203‑2572129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttgTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGCTCAGGATCATCATCACGTAGACCGTGCTCGA > AP009048/2572182‑2572250 GCTAACGGTGAAGCAGATCCAACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGC > 1:1256427/1‑71 TAACGGTGAAGCAGATCCAACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGT > 1:4809242/1‑71 TAACGGTGAAGCAGATCCAACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGT > 1:4818796/1‑71 ACGGTGAAGCAGATCCAACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGTT < 1:5049082/70‑1 ACGGTGAAGCAGATCCAACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGT < 1:6793776/69‑1 cAAGCAGAACAAACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCG < 1:4777951/62‑1 GATCCAACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCG < 1:1225558/57‑1 AACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGTTGa < 1:546961/56‑2 AACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCG > 1:4836079/1‑52 CAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGTTGTTGGATCTGCTTCACCGT > 1:2248862/1‑71 CGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCG < 1:1784543/47‑1 GGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGTTGTTGGATCTGCTTCACCGTTAGCGGC > 1:6658600/1‑68 GGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGTTGTTGGATCTGCTTCACCGTTAGCGGC > 1:1344220/1‑68 AAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGTTGTTGGATCTGCTTCACCGTTAGCGGCTGCTTC < 1:821073/71‑1 AAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGTTGTTGGATCTGCTTCACCGTTAGCGGCTGCTTC < 1:4213847/71‑1 AAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGTTGTTGGATCTGCTTCACCGTTAGCGGCTGCTTC < 1:4130095/71‑1 GTTGTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGCTCAGGATCATCATCACGTAGACCGTGCT > 1:2080879/1‑70 GTTGTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGCTCAGGATC < 1:663053/50‑1 TTGTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGCTCAGGATCATCATCACGT > 1:177745/1‑59 TTGTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGC > 1:6447798/1‑41 GTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGCTCAGGATCATCATCACGTAGACCGTGCTCGA < 1:5201878/70‑1 GTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGCTCAGGATCATCATCACGTAGACCGTGCTCGA > 1:6701349/1‑70 GTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGCTCAGGATCATCATCACGTAGACCGTGCTCGA < 1:1604015/70‑1 GTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGCTCAGGATCATCATCACGTAGAC > 1:1865960/1‑61 GTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGCTAAGGATCATCATCACGTAGACCGTGCTCGA < 1:7266066/70‑1 GCTAACGGTGAAGCAGATCCAACAACGACTGGGGGAAACGCAATGATTATTGAACGTTGTCGTGAACTGGCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2572203‑2572129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttgTTGGATCTGCTTCACCGTTAGCGGCTGCTTCGTTACGCTCAGGATCATCATCACGTAGACCGTGCTCGA > AP009048/2572182‑2572250 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |