| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2831659 = | 126 (1.550) | 6 (0.080) | 4/90 | NT | 5.3% | coding (528/1440 nt) | norV | flavorubredoxin oxidoreductase |
| ? | AP009048 | 2831685 = | 100 (1.340) | coding (554/1440 nt) | norV | flavorubredoxin oxidoreductase | |||||
TAACGCTGGCACTGCTCGAAAAGCTCCGTCTGATCCACTTCATCGTTGAACAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2831712‑2831659‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagaCGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCAGCCGCCTGGTAAC > AP009048/2831685‑2831751 TAACGCTGGCACTGCTCGAAAAGCTCCGTGTGATCCACTTCATCGTTGAACA < 1:7664893/52‑1 AACGCTGGCACTGCTCGAAAAGCTCCGTCTGATCCACTTCATCGTTGAAC < 1:7511862/50‑1 AACGCTGGCACTGCTCGAAAAGCTCCGTCTGATCCACTTCATCGTTGAAC < 1:6628172/50‑1 CTCGAAAAGCTCCGTCTGATCCACTTCATCGTTGAACAGA > 1:555198/1‑40 CTCGAAAAGCTCCGTCTGATCCACTTCATCGTTGAACAGA > 1:4089991/1‑40 GTCTGATCCACTTCATCGTTGAACAGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCC < 1:3262350/62‑1 GTCTGATCCACTTCATCGTTGAACAGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCC < 1:6465989/62‑1 TGATCCACTTCATCGTTGAACAGACGGAGCTTTTCGAGCAGTGCCAGC < 1:4928999/48‑1 TGATCCACTTCATCGTTGAACAGACGGAGCTTTTCGAGCAGTGCCAGC < 1:4398586/48‑1 CCACTTCATCGTTGAACAGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGT > 1:2162466/1‑71 CACTTCATCGTTGAACAGACGGAGCTTTTCGAGCAGTGCCAGCGT > 1:5252067/1‑45 CAGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCAGCCGCCTGGTAA > 1:5084413/1‑70 CAGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCAGCCGCCTGGTAA > 1:5711000/1‑70 CAGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCAGCCGCCTGGTAA > 1:3720917/1‑70 AGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCAGCCGCCTGGTAAC < 1:6592720/70‑1 AGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGAC < 1:6420112/49‑1 AGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGAC < 1:7107921/49‑1 GACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCAGCCGCCTGGTAAC > 1:3765280/1‑69 GACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCAGCCGCCTGGTAAC > 1:3756145/1‑69 GACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCA > 1:118473/1‑56 ACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGC > 1:1713277/1‑49 ACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGC > 1:1672560/1‑49 ACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCT < 1:4914064/44‑1 TAACGCTGGCACTGCTCGAAAAGCTCCGTCTGATCCACTTCATCGTTGAACAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2831712‑2831659‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagaCGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCAGCCGCCTGGTAAC > AP009048/2831685‑2831751 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |