| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2934479 = | 112 (1.380) | 8 (0.110) | 3/90 | NT | 6.8% | coding (240/1776 nt) | fucI | L‑fucose isomerase |
| ? | AP009048 | 2934504 = | 116 (1.550) | coding (265/1776 nt) | fucI | L‑fucose isomerase | |||||
TCGGGCGGGTTGGATCCATGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2934552‑2934479‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctTGCTGGTGCTATGGCAGTGAAACCATCGACATGGATCCAACCCGCCCGAAGGCCATTTGGGGCTTTA > AP009048/2934504‑2934570 TCGGGCGGGTTGGATCCATGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGG > 1:6245682/1‑71 CGGGCGGGTTGGATCCATGTCGATGGTTTTACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGC > 1:3030310/1‑71 CGGGCGGGTTGGATCCATGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGC > 1:2941321/1‑71 CGGGCGGGTTGGATCCATGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGC > 1:7259646/1‑71 CGGGCGGGTTGGATCCATGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGG < 1:190763/70‑1 GGGCGGGTTGGATCCATGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGC < 1:7696095/70‑1 GGGCGGGTTGGATCCATGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGC > 1:3129500/1‑70 GGCGGGTTGGATCCATGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGCCT < 1:3105454/71‑1 GCGGGTTGGATCCATGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGCCT > 1:7556471/1‑70 TGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGCCT > 1:2571234/1‑56 TGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGCCT > 1:6397216/1‑56 GATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGCC < 1:2997449/51‑1 GATGGTTTCACTGCCATAGCACCACCAAGGCGTTACCGTAATGGTGAGGCC < 1:5244599/51‑1 GTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGC < 1:2781701/46‑1 GTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGC < 1:1511956/46‑1 GTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGC < 1:3602558/46‑1 TTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGCCT > 1:49772/1‑46 CAGCAAGGCGTTACCGTAATGGTGAGGCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGGATCCAAC > 1:664159/1‑71 GGCGTTACCGTAATGGTGAGGCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGG < 1:6940775/58‑1 GGCGTTACCGTAATGGTGAGGCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGG < 1:4461554/58‑1 GGCGTTACCGTAATGGTGAGGCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGG < 1:5770655/58‑1 GGCGTTACCGTAATGGTGAGGCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGG < 1:1107107/58‑1 GGCGTTACCGTAATGGTGAGGCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGG < 1:1256510/58‑1 GGCGTTACCGTAATGGTGAGGCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGG < 1:1191910/58‑1 GCGTTACCGTAATGGTGAGGCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGGATCCAACCCGCCC > 1:3963004/1‑70 GCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGGATCCAACCCGCCCGAAGGCCATTTGGGGCTTTA < 1:7509058/71‑1 GCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGGAT > 1:4910875/1‑40 GCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGGAT > 1:5530766/1‑40 GCCTTGCTGGTGCTATGGCAGTGAAACCATCGACA > 1:7404369/1‑35 CCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGG > 1:4502877/1‑37 CCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGG > 1:363008/1‑37 CTTGCTGGTGCTATGGCAGTGAAACCATCGACATGG < 1:2704953/36‑1 CTTGCTGGTGCTATGGCAGTGAAACCATCGACATG < 1:3058368/35‑1 TTGCTGGTGCTATGGCAGTGAAACCATCGACATGGA < 1:6427329/36‑1 TCGGGCGGGTTGGATCCATGTCGATGGTTTCACTGCCATAGCACCAGCAAGGCGTTACCGTAATGGTGAGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2934552‑2934479‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctTGCTGGTGCTATGGCAGTGAAACCATCGACATGGATCCAACCCGCCCGAAGGCCATTTGGGGCTTTA > AP009048/2934504‑2934570 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |