| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3037146 | 83 (1.020) | 13 (0.190) | 5/84 | NT | 15.3% | coding (333/711 nt) | dsbC | protein disulfide isomerase II |
| ? | AP009048 | = 3037153 | 73 (1.050) | coding (326/711 nt) | dsbC | protein disulfide isomerase II | |||||
TGATCCCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3037070‑3037146‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacacgTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACAA < AP009048/3037153‑3037084 TGATCCCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTA < 1:7025921/71‑1TGATCCCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTA < 1:794560/71‑1TGATCCCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTA < 1:5642296/71‑1 ATCCCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA < 1:4871970/71‑1 ATCCCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA < 1:1494005/71‑1 CCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACAC < 1:2164214/71‑1 CCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACA > 1:1340682/1‑69 CCAGCGCGTTGTAGGCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAA < 1:3099238/66‑1 CAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAt < 1:4365965/65‑2 AGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA < 1:4572969/65‑1 AGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAA < 1:6879253/64‑1 GCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACAC < 1:5156628/67‑1 GCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA > 1:560669/1‑64 GCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA > 1:3052739/1‑64 GCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA > 1:6852808/1‑64 GCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA > 1:4078563/1‑64 GCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA > 1:1123557/1‑64 GCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA > 1:1939654/1‑64 GCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA > 1:7347125/1‑64 GCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACAACAGGTAATATCAGTAAACAC < 1:6094378/67‑1 CGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAAC‑‑CAGGTAATATCAGTAAACA > 1:7511418/1‑63 GTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGT < 1:1598210/70‑1 GTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGT < 1:3738103/70‑1 TGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA < 1:6453919/51‑1 TGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATAACAGTAAA < 1:7181550/51‑1 GCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTT < 1:2692477/68‑1 GCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTT < 1:1004100/68‑1 CATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTTAC > 1:5978520/1‑68 CATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTTAC > 1:296170/1‑68 CATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTTAC > 1:5342068/1‑68 TTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA < 1:1874308/46‑1 TTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA < 1:779409/46‑1 TTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA < 1:1258645/46‑1 TTTGCTCATCCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACt < 1:4496680/50‑2 TGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAAC > 1:1732768/1‑45 CATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA > 1:872298/1‑40 CATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAA > 1:4459755/1‑40 GTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTTAC > 1:7807011/1‑54 GTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTTAC > 1:1887877/1‑54 GTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTTAC > 1:4497994/1‑54 GTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTTAC > 1:5455970/1‑54 GTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTTAC > 1:5320318/1‑54 TTTGTGGCAGTAACCACAGGTAATATCAGTAAACACG < 1:6204445/37‑1 TGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTTAC > 1:2178668/1‑51 TGTGGCAGTAACCACAGGTAATATCAGTAAACACG > 1:2920395/1‑35 AAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGc > 1:6969137/1‑70 AAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGA > 1:4075172/1‑71 AAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGA < 1:4417142/71‑1 AAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGA > 1:145121/1‑71 AAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGA > 1:3663939/1‑71 AAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAAT < 1:4368196/65‑1 AAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAAT < 1:1946040/65‑1 AACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGAC < 1:3869758/71‑1 AACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGAC < 1:7906619/71‑1 ACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACT < 1:1939170/71‑1 ACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGAC > 1:6653391/1‑70 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTA > 1:6559638/1‑71 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTA > 1:6706937/1‑71 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTA > 1:3952156/1‑71 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTA > 1:6885275/1‑71 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTA < 1:5595916/71‑1 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTA > 1:5506754/1‑71 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTA > 1:5328109/1‑71 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACT > 1:1628077/1‑40 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACT > 1:532338/1‑40 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACT > 1:5025508/1‑40 ACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTA < 1:1335811/70‑1 CGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACA < 1:2170151/71‑1 CGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACA < 1:5868538/71‑1 GTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACAA > 1:6352173/1‑71 GTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACAA > 1:7432265/1‑71 GTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACAA > 1:2095817/1‑71 GTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGA > 1:1327129/1‑65 TGATCCCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3037070‑3037146‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacacgTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACAA < AP009048/3037153‑3037084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |