| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3141945 = | 118 (1.450) | 9 (0.130) | 3/86 | NT | 8.4% | coding (876/1179 nt) | hybB | predicted hydrogenase 2 cytochrome b type component |
| ? | AP009048 | 3141978 = | 92 (1.290) | coding (843/1179 nt) | hybB | predicted hydrogenase 2 cytochrome b type component | |||||
CGAGCTTATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3142020‑3141945‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCGC > AP009048/3141978‑3142046 CGAGCTTATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTG < 1:5341990/71‑1 AGCTTATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTG > 1:4651960/1‑69 GCTTATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAAG > 1:5482391/1‑71 TATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTG > 1:7059262/1‑65 TATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTG > 1:5646635/1‑65 TATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTG > 1:6468032/1‑65 TATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTG > 1:6674338/1‑65 ATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAA > 1:7432784/1‑66 TATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTG < 1:1151849/61‑1 GCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAA > 1:5567105/1‑59 GCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAA > 1:7040909/1‑59 GCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAA > 1:4598067/1‑59 AAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAA > 1:2498396/1‑54 AAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGA > 1:1319837/1‑53 AAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCAGGATTGA > 1:6970401/1‑53 GCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAAGTC > 1:1399577/1‑55 GCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAAGTC > 1:6725181/1‑55 GCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAAGTC > 1:3700635/1‑55 GTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAA > 1:1042761/1‑49 GTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAA > 1:3614758/1‑49 TGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAA > 1:4736801/1‑37 CTACTCCGTGATGTTCTGGATTGAAGTCACCGGCAAACGCTAACGACAGCTTGTCG > 1:3848954/1‑56 CTACTCCGTGATGTTCTGGATTGAAGTCACCGGCAAACGCTAACGACAGCTTGTCG > 1:3083981/1‑56 CTACTCCGTGATGTTCTGGATTGAAGTCACCGGCAAACGCTAACGACAGCTTGTCG > 1:6781656/1‑56 CTACTCCGTGATGTTATGGATTGAAGTCACCGGCAAACGCTAACGAAAGCTTGTCG > 1:6789926/1‑56 CTCCGTGATGTTCTGGATTGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGA > 1:2407984/1‑60 CTCCGTGATGTTCTGGATTGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGA > 1:1115478/1‑60 CTCCGTGATGTTCTGGATTGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGA > 1:6955457/1‑60 CTCCGTGATGTTCTGGATTGAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGA > 1:1032989/1‑60 TGTTCTGGATTGAAGTCACCGGCAAACGCTAACGACAGCTTGT < 1:219463/43‑1 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAA < 1:474499/71‑1 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAA > 1:5089676/1‑71 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAA > 1:5502190/1‑71 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAA > 1:1266306/1‑71 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAA < 1:6312519/70‑1 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAA < 1:4835991/70‑1 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGA < 1:5443452/65‑1 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCA > 1:1348232/1‑62 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGA > 1:5435904/1‑37 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGA > 1:1264581/1‑37 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGA > 1:3106002/1‑37 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGA > 1:3432663/1‑37 GAAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGA > 1:7118724/1‑37 AAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAA < 1:5273209/70‑1 AAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCG < 1:57761/56‑1 AAGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATA > 1:410245/1‑42 AAGTCACCGGCAAACGCTAACGAAAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAAT > 1:6825615/1‑71 AGTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATC < 1:5324735/71‑1 GTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCG > 1:5703092/1‑71 GTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCG > 1:2534492/1‑71 GTCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCG < 1:7307783/54‑1 TCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCGC > 1:2990704/1‑71 TCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAA < 1:4944455/66‑1 TCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCA > 1:2166991/1‑55 TCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGC < 1:7254972/42‑1 TCACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGC < 1:5666115/42‑1 TCACCGGCAAACGCTAACGACAGCTTGTCGCGATAG < 1:3426667/36‑1 TCACCGGCAAACGCTAACGACAGCTTGTCGCGATAG < 1:1969840/36‑1 CACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCGC > 1:2388837/1‑70 CACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAA < 1:6808298/66‑1 CACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAA < 1:4996080/66‑1 CGAGCTTATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAAGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3142020‑3141945‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagtcACCGGCAAACGCTAACGACAGCTTGTCGCGATAGATAAGCTCGCCAAAGCGCAGCACGATGAAAATCGC > AP009048/3141978‑3142046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |