| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3176034 = | 117 (1.440) | 7 (0.100) | 6/88 | NT | 6.0% | coding (533/630 nt) | nudF | ADP‑ribose pyrophosphatase |
| ? | AP009048 | 3176059 = | 115 (1.570) | coding (508/630 nt) | nudF | ADP‑ribose pyrophosphatase | |||||
AAGCGGTATTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3176108‑3176034‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccaCATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTC > AP009048/3176059‑3176128 AAGCGGTATTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCAT < 1:1333902/71‑1 GCGGTATTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATAC < 1:7117435/71‑1 CGGTATTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATACC < 1:3582554/71‑1 GGTATTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATACCA < 1:7326667/71‑1 TTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATACC < 1:861401/66‑1 TTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATACC < 1:6287928/66‑1 TTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATACC < 1:4478815/66‑1 CACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATA > 1:2419448/1‑62 AACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATAC < 1:6642953/45‑1 ATGTGGTAAGCCGGGAACAGGCATACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGT < 1:1952189/67‑1 GTGGTAAGCCGGGAACAGGCATACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGA > 1:436281/1‑61 TGGTAAGCCGGGAACAGGCATACCACATGAACGCGAATATCTT > 1:4087837/1‑43 GTAAGCCGGGAACAGGCATACCACATGAACGCGAAT < 1:7180601/36‑1 GTAAGCCGGGAACAGGCATACCACATGAACGCGAAT < 1:3534737/36‑1 CGGGAACAGGCATACCACATGAACGCGAATATCTTCGTTT > 1:4360574/1‑40 GGGAACAGGCATACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAA > 1:6702773/1‑58 ACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCC < 1:6077642/69‑1 CCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACT < 1:4000747/71‑1 CCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACT < 1:3147046/71‑1 CCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGATTGCGGTCGTGGCGTCCACT > 1:2592524/1‑71 CCACATGAACGCGAATATCTTCGTTTTCATCAGCCA > 1:1577971/1‑36 CCACATGAACGCGAATATCTTCGTTTTCATCAGCC > 1:4296196/1‑35 CACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATA < 1:845518/46‑1 ACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTC > 1:7478367/1‑71 ACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTC > 1:962395/1‑71 ACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACC > 1:307929/1‑47 ACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACC > 1:2678156/1‑47 AAGCGGTATTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3176108‑3176034‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccaCATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTC > AP009048/3176059‑3176128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |