| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3520330 = | 77 (0.950) | 4 (0.050) | 3/88 | NT | 5.5% | coding (872/1509 nt) | glpK | glycerol kinase |
| ? | AP009048 | 3520352 = | 69 (0.940) | coding (894/1509 nt) | glpK | glycerol kinase | |||||
ACTGAATGGATGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3520404‑3520330‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgaAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAAAT > AP009048/3520352‑3520420 ACTGAATGGATGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAG > 1:7853062/1‑71ACTGAATGGATGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAG > 1:4219704/1‑71 TGAATGGATGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGC > 1:5793424/1‑71 cagTGGCTGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGC > 1:4838370/4‑70 cagTGGCTGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGC > 1:52181/4‑70 cagTGGCTGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGC > 1:3708326/4‑70 AATGGATGCGCCTGCCATAACCACCGCACCTTCCACCGCATAGTTCACTTCGCCAGTCGGGCCGCAGGCGA < 1:5256836/71‑1 AATGGATGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGCGA > 1:4420965/1‑71 AATGGATGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGC < 1:7701389/69‑1 ATGGATGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGCGA < 1:3228153/70‑1 GATGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAG > 1:3967833/1‑63 CATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGCGA > 1:2817006/1‑56 CATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGCGA > 1:5498933/1‑56 AACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGG > 1:5337700/1‑49 AACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGG > 1:3991400/1‑49 ACTTCGCCAGTCGGGCCGCAGGCGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATC > 1:212885/1‑70 TTCGCCAGTCGGGCCGCAGGCGAAGTGAACTATGCGTTGGAATGTGCGGTGTTTATGGCA < 1:3317554/60‑1 TTCGCCAGTCGGGCCGCAGGCGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCA < 1:5188035/60‑1 CGCCAGTCGGGCCGCAGGCGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGG > 1:2688495/1‑60 GCGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTGAGTGGCTGCGCGATGA > 1:716347/1‑70 GCGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAA < 1:919261/71‑1 GCGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATG < 1:5751632/69‑1 GCGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCG < 1:785620/66‑1 CGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAAA < 1:3960794/71‑1 CGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAAA < 1:360782/71‑1 CGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAAA > 1:2846922/1‑71 CGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAAA < 1:2716753/71‑1 GAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGAT > 1:485311/1‑66 GAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGAT > 1:4658302/1‑66 GAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGAT > 1:3825857/1‑66 GAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGAT > 1:7529672/1‑66 GAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCG > 1:7659872/1‑64 GAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGC > 1:2492013/1‑58 AAGTGAACTATGCGTTGGAATGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGA < 1:2021740/67‑1 AAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGTCGCATCCATT < 1:1875989/50‑1 AAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAAAT > 1:7483448/1‑70 AAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAAAT > 1:2441876/1‑70 ACTGAATGGATGCGCCTGCCATAAACACCGCACCTTCCAACGCATAGTTCACTTCGCCAGTCGGGCCGCAGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3520404‑3520330‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgaAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAAAT > AP009048/3520352‑3520420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |