| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3733927 = | 80 (0.980) | 5 (0.070) | 3/92 | NT | 6.8% | coding (948/1413 nt) | bglB | cryptic phospho‑beta‑glucosidase B |
| ? | AP009048 | 3733952 = | 63 (0.820) | coding (973/1413 nt) | bglB | cryptic phospho‑beta‑glucosidase B | |||||
GGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3733995‑3733927‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccAATCCGCATCTGAAAAGTTCAGAGTGGGGGTGGCAAATTGATCCGGTTGGATTACGGGTTCTGTTAAAT > AP009048/3733952‑3734020 GGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCC < 1:5423956/69‑1GGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCC < 1:7254821/69‑1 CCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCC < 1:1118633/57‑1 CCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCC < 1:3833656/57‑1 CCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCC < 1:7737401/57‑1 TGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCC > 1:409398/1‑45 TGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCC > 1:4374233/1‑45 TGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCC > 1:7056116/1‑45 TGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCC > 1:7543264/1‑45 TGGGGATCATATTCAGTATGTTGCCCAATCCGCATCTGAAAAGTTCAGAGTGGGGGTGGCAAATTGATCCG > 1:1450650/1‑71 GGGGATCATATTCAGTATGTTGCCCAATCCGCATCTGAAAA < 1:2615246/41‑1 GGATCATATTCAGTATGTTGCCCAATCCGCATCTGAAAAGT > 1:3090752/1‑41 GGATCATATTCAGTATGTTGCCCAATCCGCATCTGAAAAGT > 1:5560854/1‑41 GGATCATATTCAGTATGTTGCCCAATCCGCATCTGAAAAGT > 1:6704545/1‑41 CCAATCCGCATCTGAAAAGTTCAGAGTGTGGGTGGCAAATTGATCCGGTTTGATTACGGGTTCTGTTAAAT < 1:1715079/71‑1 GGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3733995‑3733927‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccAATCCGCATCTGAAAAGTTCAGAGTGGGGGTGGCAAATTGATCCGGTTGGATTACGGGTTCTGTTAAAT > AP009048/3733952‑3734020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |