| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3827217 | 95 (1.170) | 7 (0.090) | 4/92 | NT | 7.5% | coding (468/1221 nt) | dfp | fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase, FMN‑binding |
| ? | AP009048 | = 3827232 | 84 (1.100) | coding (453/1221 nt) | dfp | fused 4'‑phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase, FMN‑binding | |||||
AAAATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3827145‑3827217‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGATCCGTTAACCATTGTGGA < AP009048/3827232‑3827164 AAAATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAG > 1:3965697/1‑71AAAATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAG > 1:978721/1‑71AAAATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAG > 1:4388248/1‑71AAAATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAG > 1:1329720/1‑71AAAATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAG > 1:2997812/1‑71 AAATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAGC > 1:7153876/1‑71 AAATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAGC > 1:3192027/1‑71 AATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAGCC > 1:867646/1‑71 AATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAGC < 1:5913821/70‑1 TATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAGCC > 1:3051487/1‑56 TATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAGC > 1:3287925/1‑55 CACAATGGTTAACGGATCGATCATTCGCCCAGGACCGATATCACCACAAG < 1:7358258/50‑1 CACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAG < 1:7662664/50‑1 CACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAG < 1:1889863/50‑1 CACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAG < 1:2777914/50‑1 CACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAG < 1:2642597/50‑1 TGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAGCCAGACAGTGGCAGTCAGGCTTGTG > 1:2934889/1‑70 ATCGAGCATTCGCCCAGGACCGATATCACCACAAGC > 1:3061911/1‑36 ATCGAGCATTCGCCCAGGACCGATATCACCACAAGC > 1:410123/1‑36 ATCGAGCATTCGCCCAGGACCGATATCACCACAAGC > 1:7455110/1‑36 ATCGAGCATTCGCCCAGGACCGATATCACCACAAGC > 1:5939997/1‑36 ATCGAGCATTCGCCCAGGACCGATATCACCACAAG > 1:7728286/1‑35 AGCATTCGCCCAGGACCGATATCACCACAAGCCAGACAGTGGCAGTCA < 1:1665519/48‑1 CATTCGCCCAGGACCGATATCACCACAAGCCAGACAGTGGCAGTCAGG > 1:4226037/1‑48 TCGCCCAGGACCGATATCACCACAAGCCAGACAGTGGCAGTCAGGC > 1:1981284/1‑46 TCGCCCAGGACCGATATCACCACAAGCCAGACAGTGGCAGTCAGGC > 1:7364718/1‑46 TCGCCCAGGACCGATATCACCACAAGCCAGACAGTGGCAGTCAGGC > 1:5915185/1‑46 TCGCCCAGGACCGATATCACCACAAGCCAGACAGTGGCAGTCAGGC > 1:2690257/1‑46 GCCAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGATCCGTTAACCATTGTG > 1:1563407/1‑70 CCAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGATCCGTTAACCATTGTGGA > 1:3673623/1‑71 CCAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGATCCGTTAACCATTG < 1:3930736/67‑1 CCAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGATCCGTT < 1:7213642/59‑1 CCAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGATCCGTT < 1:3107295/59‑1 CCAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGAT > 1:4771350/1‑54 CCAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGAT > 1:2565987/1‑54 CAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGATCCGTTAAC < 1:4214355/61‑1 AAAATGCGCTACCGCCATATCCACAATGGTTAACGGATCGAGCATTCGCCCAGGACCGATATCACCACAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3827145‑3827217‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGATCCGTTAACCATTGTGGA < AP009048/3827232‑3827164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |