| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3922867 | 75 (0.920) | 5 (0.070) | 4/84 | NT | 6.4% | coding (239/975 nt) | tiaE | 2‑keto‑D‑gluconate reductase |
| ? | AP009048 | = 3922891 | 81 (1.160) | coding (215/975 nt) | tiaE | 2‑keto‑D‑gluconate reductase | |||||
ATCGGCGACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3922791‑3922867‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatcaaCGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACA < AP009048/3922891‑3922823 ATCGGCGACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGA > 1:4390721/1‑71 TCGGCGACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGAC < 1:1196779/71‑1 TCGGCGACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGA < 1:7400154/70‑1 GGCGACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACA > 1:6018132/1‑70 GACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAA < 1:4315445/71‑1 ACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAA > 1:880755/1‑70 ACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGAC < 1:5033546/65‑1 ATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGAC < 1:7790449/52‑1 ATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGAC < 1:4170653/52‑1 TACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCA < 1:635331/55‑1 TACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCA < 1:1471679/55‑1 GAATTTTTCGGGCGGTAAGCGCATCGACATCAACGATCTCCGTCGGCTATGACAAT < 1:2848227/56‑1 ATTTTTCGGGCGGTAAGCGCATCGACATCAACGATCTCCGTCGGCTATGACAATTT > 1:203354/1‑56 TTTCGGGCGGTAAGCGCATCGACATCAACGATCTCCGTCGGCTATGACAATTTTGAT < 1:2116381/57‑1 GCGGTAAGCGCATCGACATCAACGATCTCCGTCGGCTATGACAATTTTGAT > 1:1614728/1‑51 GCGGTAAGCGCATCGACATCAACGATCTCCGTCGGCTATGACAATTTTGAT > 1:5941633/1‑51 ACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGAT < 1:4275639/71‑1 ACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCT < 1:2939212/68‑1 CATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATG > 1:7220434/1‑71 CATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGC > 1:122438/1‑45 CATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGC > 1:1479855/1‑45 CATCAACGATCTCCGTCGGCTATGACAATTTTGATGT > 1:2782111/1‑37 TCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCG < 1:58313/49‑1 TCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCG < 1:4473969/49‑1 AACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACA > 1:7729218/1‑71 AACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACA > 1:798648/1‑71 AACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCC > 1:1522913/1‑49 ACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCT > 1:2691654/1‑41 ACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCT > 1:1371268/1‑41 ACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCT > 1:7776351/1‑41 ACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGC > 1:4621499/1‑40 ACGATCTCCGTCGGCTATGACAATTTTGATGTCGAAGCGC > 1:518948/1‑40 ACGATCTCCGTCGGCTATGACAATTTTGATGTCGA > 1:7473393/1‑35 ATCGGCGACGGTTTCTGTTAATACGGTTGGCGTGTGCATCAGCAGAATTTTTCGGGCGGTAAGCGCATCGACATCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3922791‑3922867‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatcaaCGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACA < AP009048/3922891‑3922823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |