| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 4057520 = | 108 (1.330) | 7 (0.100) | 5/86 | NT | 8.1% | coding (1033/1179 nt) | yhhZ | conserved hypothetical protein |
| ? | AP009048 | 4057546 = | 65 (0.910) | coding (1007/1179 nt) | yhhZ | conserved hypothetical protein | |||||
ATAATGTTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/4057591‑4057520‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaaaTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > AP009048/4057546‑4057615 ATAATGTTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGA > 1:6195886/1‑70 TAATGTTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:6406751/70‑1 TAATGTTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:6211885/70‑1 TAATGTTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:2619857/70‑1 TAATGTTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:4495763/70‑1 TAATGTTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:7059826/70‑1 TTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:273602/65‑1 TCACCATAAACTATATCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGA < 1:78091/63‑1 ACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:6411219/62‑1 ATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:6893970/52‑1 GGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:6882035/39‑1 GGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:258908/39‑1 GGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAA < 1:6075300/39‑1 AATGATTTCGAAAATTTAGTATTAATCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGG > 1:3296098/1‑67 TGATTTCGAAAATTTAGTATTAATCGAAAACATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACA > 1:3453082/1‑71 TTTCGAAAATTTAGTATTAATCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTA > 1:4502346/1‑71 TTTCGAAAATTTAGTATTAATCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATT > 1:6502564/1‑70 TTTCGAAAATTTAGTATTAATCGAAATCATTAGTACCA > 1:7099335/1‑38 TTTCGAAAATTTAGTATTAATCGAAAACATTAGTACCACCATCATCTAGAGATAGTTTAT < 1:7335011/60‑1 TTCGAAAATTTAGTATTAATCGAAATCATTAGTACCACCATCATCTAGAGATAGTTTA < 1:4327385/58‑1 CGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCC > 1:3345953/1‑71 CGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAA < 1:2181241/63‑1 CGAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAA < 1:1432702/63‑1 GAAATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTA < 1:1500991/56‑1 AATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTT > 1:4509870/1‑71 AATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTT < 1:3390373/71‑1 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCac > 1:7351842/1‑65 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > 1:6363688/1‑71 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > 1:4595160/1‑71 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > 1:6768864/1‑71 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > 1:70338/1‑71 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > 1:3236532/1‑71 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > 1:7223968/1‑71 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > 1:2536254/1‑71 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > 1:24267/1‑71 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCT > 1:2634305/1‑68 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGACCTTTC > 1:6303488/1‑71 ATCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTG > 1:4432696/1‑64 ATAATGTTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/4057591‑4057520‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaaaTCATTAGTACCACCATCATCTAGAGATAGTTTATGGTGAACATTATAATTTAGAGGAACATTGCCCTTTC > AP009048/4057546‑4057615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |