New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AP009048	4290004 =	73 (0.900)	7 (0.090)	3/96	NT	8.9%	coding (958/1959 nt)	acs	bifunctional acetyl‑CoA synthetase and propionyl‑CoA synthetase
	?	AP009048	4290033 =	72 (0.900)					coding (929/1959 nt)	acs	bifunctional acetyl‑CoA synthetase and propionyl‑CoA synthetase

GGGTGATATCTACTGGTGCACCGCCGATGTGGGCTGGGTGACCGGACACAGTTACTTGCTGTACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AP009048/4290071‑4290004 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGT  >  AP009048/4290033‑4290100                                                                                                                                          GGGTGATATCTACTGGTGCACCGCCGATGTGGGCTGGGTGACCGGACACAGTTACTTGCTGTACGGCCAgc                                                                   >  1:7207268/1‑69           TACTGGTGCACCGCCGATGTGGGCTGGGTGACCGGACACAGTTACTTGCTGTACGGCC                                                                      >  1:4003661/1‑58           TACTGGTGCACCGCCGATGTGGGCTGGGTGACCGGACACAGTTACTTGCTGTACGGCC                                                                      >  1:6218014/1‑58                                        GACCGGACACAGTTACTTGCTGTACGGCCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGA                            >  1:3165968/1‑71                                         ACCGGACACAGTTACTTGCTGTACGGCCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCA                                  <  1:1325976/64‑1                                         ACCGGACACAGTTACTTGCTGTACGGCCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCA                                  <  1:6897237/64‑1                                         ACCGGACACAGTTACTTGCTGTACGGCCACCCAGCCCACATCGGCG                                                    >  1:1751003/1‑46                                         ACCGGACACAGTTACTTGCTGTACGGCCACCCAGCCCACATCGGCG                                                    >  1:4619042/1‑46                                         ACCGGACACAGTTACTTGCTGTACGGCCACCCAGCCCACATCGGCG                                                    >  1:5613171/1‑46                                         ACCGGACACAGTTACTTGCTGTACGGCCACCAAGCCCACATCGGCG                                                    >  1:6042291/1‑46                                                                    CACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGT  >  1:6597300/1‑69                                                                                                                                          GGGTGATATCTACTGGTGCACCGCCGATGTGGGCTGGGTGACCGGACACAGTTACTTGCTGTACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AP009048/4290071‑4290004 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGT  >  AP009048/4290033‑4290100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.