| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 4462605 = | 105 (1.290) | 4 (0.060) | 3/84 | NT | 5.0% | intergenic (‑60/‑34) | yjgA/pmbA | conserved hypothetical protein/predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 |
| ? | AP009048 | 4462627 = | 63 (0.900) | intergenic (‑82/‑12) | yjgA/pmbA | conserved hypothetical protein/predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTGCGCTTCAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAGAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/4462680‑4462605‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagagaaACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTCAAGTTGAAGCGCAGCGCAAGATTCTGGAAG > AP009048/4462627‑4462696 CTGCGCTTCAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACA < 1:5002525/71‑1CTGCGCTTCAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACA < 1:2210453/71‑1 tctCTTCAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAG < 1:822715/67‑1 GCGCTTCAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAG < 1:354431/70‑1 GCGCTTCAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACA > 1:3881503/1‑69 GCTTCAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAGAG > 1:694690/1‑70 GCTTCAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAGAG < 1:592139/70‑1 CTTCAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAGA > 1:1876744/1‑68 CAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAAC > 1:1702772/1‑62 AACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACA > 1:739614/1‑62 AACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACA > 1:5958133/1‑62 CTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAG < 1:612670/61‑1 CTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAG < 1:6574486/61‑1 GAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAAC > 1:1739068/1‑54 GAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAAC > 1:5864353/1‑54 ACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAGAGA < 1:7230919/53‑1 TGCAAGTGCCATAATGTAGAGAGTTTATCTGAAGTCTAACAGAGca > 1:2125635/1‑44 GTTTCTCTGAAGTCTAACAGAGAAACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTCAAGTTG > 1:4187379/1‑70 TCTCTGAAGTCTAACAGAGAAACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTCA > 1:1777612/1‑62 TCTCTGAAGTCTAACAGAGAAACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTCA > 1:7091893/1‑62 CTCTGAAGTCTAACAGAGAAACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTC < 1:2129840/60‑1 CAGAGAAACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTCAAGTTGAAGCGCAGCGCAAGATTC > 1:172274/1‑71 CAGAGAAACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTCAAGTTGAAGCGCAGCGCAAGAT < 1:4544144/69‑1 AGAGAAACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTCAAGTTGAAGCGCA < 1:484931/59‑1 AGAAACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTCAAGTTGAAGCGCAGCGCAAGATTCTG > 1:3576500/1‑70 AACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTCAAGTTGAAGCGCAGCGCAAGATTCTGGAAG < 1:3844644/71‑1 CTGCGCTTCAACTTGAGAGATTACTTTCATTGCAAGTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAGAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/4462680‑4462605‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagagaaACTCTCTACATTATGGCACTTGCAATGAAAGTAATCTCTCAAGTTGAAGCGCAGCGCAAGATTCTGGAAG > AP009048/4462627‑4462696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |