| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 4609762 = | 90 (1.110) | 12 (0.160) | 4/88 | NT | 13.4% | coding (582/789 nt) | fhuF | ferric iron reductase involved in ferric hydroximate transport |
| ? | AP009048 | 4609788 = | 74 (1.010) | coding (556/789 nt) | fhuF | ferric iron reductase involved in ferric hydroximate transport | |||||
CAAGCACTAGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTGGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/4609836‑4609762‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtatTACTCCAGATAAGTTTGCCGTTGATCTCTCCGGTCGCTTCTAGTGCTTGCACAACCGGAACCAGCG > AP009048/4609788‑4609853 CAAGCACTAGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTG > 1:240425/1‑71CAAGCACTAGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTG > 1:3116000/1‑71 AAGCACTAGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTGG > 1:7358271/1‑71 AAGCACTAGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGAT‑AACTGG > 1:3578188/1‑70 AGCACTAGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTGGT < 1:2629611/71‑1 CTAGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTGGT < 1:7036189/67‑1 AGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTG < 1:6483974/63‑1 AGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTGGT < 1:1684289/62‑1 CCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTGGT > 1:7700269/1‑57 AACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTGGTAT > 1:7537259/1‑48 GCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTGGTAT > 1:6742637/1‑44 CCGGTTATTTGATCAACTGGTATTACTCCAGATAAGTTTGCCGTTGATCTCTCCGGTCG > 1:5125770/1‑59 CCGGTTATTTGATCAACTGGTATTACTCCAGATAAGTTTGCCGTTGATCTCTCCGGTCG > 1:4895313/1‑59 CCGGTTATTTGATCAACTGGTATTACTCCAGATAAGTT < 1:6058130/38‑1 CCGGTTATTTGATCAACTGGTATTACTCCAGATAAGTT < 1:3239606/38‑1 CCGGTTATTTGATCAACTGGTATTACTCCAGATAAGTT < 1:2943310/38‑1 CCGGTTATTTGATCAACTGGTATTACTCCAGATAAGTT < 1:2664242/38‑1 CCGGTTATTTGATCAACTGGTATTACTCCAGATAAGTT < 1:1241553/38‑1 CCGGTTATTTGATCAACTGGTATTACTCCAGATAAGT > 1:696915/1‑37 GGTTATTTGATCAACTGGTATTACTCCAGATAAGTTTG > 1:3284052/1‑38 GGTTATTTGATCAACTGGTATTACTCCAGATAAGTTTG > 1:7152460/1‑38 TTATTTGATCAACTGGTATTACTCCAGATAAGTTTGCCGTTGATCTC > 1:661726/1‑47 TTATTTGATCAACTGGTATTACTCCAGATAAGTTTGCCGTTGATCTC > 1:2924192/1‑47 GTATTACTCCAGATAAGTTTGCCGTTGATCTCTCCGGTCGCTTCTAGTGCTTGCACAACCGGAACCAGCG > 1:5639382/1‑70 GTATTACTCCAGATAAGTTTGCCGTTGATCTCTCCGGTCGCTTCTAGTGCTT < 1:5688184/52‑1 TTACTCCAGATAAGTTTGCCGTTGATCTCTCCGTTCGCTTCTAGTGCTTGCACAACC > 1:7748258/1‑57 TTACTCCAGATAAGTTTGCCGTTGATCTCTCCGGTCGCT > 1:5755569/1‑39 TTACTCCAGATAAGTTTGCCGTTGATCTCTCCGGTCGC < 1:1617373/38‑1 CAAGCACTAGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTGGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/4609836‑4609762‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtatTACTCCAGATAAGTTTGCCGTTGATCTCTCCGGTCGCTTCTAGTGCTTGCACAACCGGAACCAGCG > AP009048/4609788‑4609853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |