| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2506069 = | 88 (1.080) | 5 (0.070) | 3/88 | NT | 6.6% | coding (241/735 nt) | ypdB | predicted response regulator in two‑component system withYpdA |
| ? | AP009048 | 2506092 = | 63 (0.860) | coding (264/735 nt) | ypdB | predicted response regulator in two‑component system withYpdA | |||||
Only 100 of 116 total aligned reads displayed.
GTCGCTGGATGGCGTGTTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCA > AP009048/2505999‑2506139 | catcccggtaatacgtgactcctgatacggtttgagaatgtagtcaaacgcctccagttcaaacgcttcta < 1:445781‑M1/1‑1 (MQ=255) atcccggtaatacgtgactcctgatacggtttgagaatgtagtcaaacgcctccagttcaaacgcttctAc < 1:3830448‑M1/2‑1 (MQ=255) atcccggtaatacgtgactcctgatacggtttgagaatgtagtcaaacgcctccagttcaaacgcttctAc < 1:3364685‑M1/2‑1 (MQ=255) tcccggtaatacgtgactcctgatacggtttgagaatgtagtcaaacgcctccagctcaaacgcttctAcc < 1:7623677‑M1/3‑1 (MQ=255) gCTGGATGGCGTGTTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCAcc < 1:4480544/70‑1 (MQ=255) gCTGGATGGCGTGTTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACcg > 1:3661237/1‑71 (MQ=255) cccggtaatacgtgactcctgatacggtttgagaatgtagtcaaacgcctccagttcaaacgcttctACcg < 1:4013213‑M1/4‑1 (MQ=255) ccggtaatacgtgactcctgatacggtttgagaatgtagtcaaacgcctccagttcaaacgcttctACcgc > 1:890703‑M1/67‑71 (MQ=255) aTGGCGTGTTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTg < 1:4610653/70‑1 (MQ=255) gCGTGTTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGaaa < 1:5615383/71‑1 (MQ=255) gCGTGTTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGa > 1:1111169/1‑69 (MQ=255) gCGTGTTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGa > 1:5436503/1‑69 (MQ=255) tgtTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGaa > 1:5918143/1‑71 (MQ=255) tgtTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGaa < 1:3639891/71‑1 (MQ=255) ttGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACa > 1:674597/1‑71 (MQ=255) tGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACa > 1:5849157/1‑70 (MQ=255) tGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACAt > 1:2397855/1‑71 (MQ=255) tGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCAc > 1:802319/1‑52 (MQ=255) tGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCg > 1:4718527/1‑71 (MQ=255) gcgcAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCgg < 1:4095624/70‑1 (MQ=255) gcgcAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGt < 1:4221932/71‑1 (MQ=255) cAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGa < 1:5168744/71‑1 (MQ=255) cAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGa < 1:4928535/71‑1 (MQ=255) cAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTCTGTTCATCACCGCGTGGAAAGAACATGCGGTAGa < 1:2213229/71‑1 (MQ=255) aaaaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAg > 1:2957772/1‑69 (MQ=255) aaaaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGaa < 1:1504619/71‑1 (MQ=255) aaaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCAACGCGTGGAAAGaa > 1:4248837/1‑58 (MQ=255) aaaCATCAGACAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGaa > 1:2429708/1‑58 (MQ=255) aaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTgg < 1:3906002/51‑1 (MQ=255) aaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTgg < 1:3577834/51‑1 (MQ=255) aaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGc < 1:5376184/71‑1 (MQ=255) aaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGc > 1:4328036/1‑71 (MQ=255) aaCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGc > 1:7664453/1‑71 (MQ=255) aCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCg > 1:1254625/1‑71 (MQ=255) aCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCg > 1:3257036/1‑71 (MQ=255) aCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCg > 1:7029438/1‑71 (MQ=255) aCATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCg > 1:5897436/1‑71 (MQ=255) cATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGt < 1:1877404/71‑1 (MQ=255) aTCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGtt < 1:906977/71‑1 (MQ=255) aGCGAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGt > 1:7191817/1‑67 (MQ=255) gCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGt > 1:1107191/1‑42 (MQ=255) ccAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGaa > 1:6021715/1‑49 (MQ=255) ccAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGaa > 1:6619491/1‑49 (MQ=255) ccAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGaa > 1:1821946/1‑49 (MQ=255) cAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACt > 1:4629526/1‑71 (MQ=255) atgtagtcaaacgcctccagttcaaacgcttctACcgc > 1:3088154‑M1/34‑38 (MQ=255) aGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAg > 1:6682020/1‑57 (MQ=255) aGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAg > 1:600727/1‑57 (MQ=255) aGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTg < 1:7118284/71‑1 (MQ=255) gTTCGCCCATAAACCGATTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTgg < 1:443695/71‑1 (MQ=255) ttCGGCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATg < 1:7701065/49‑1 (MQ=255) ttCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATg < 1:7842615/49‑1 (MQ=255) ttCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATg < 1:2911442/49‑1 (MQ=255) ttCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATg < 1:5227305/49‑1 (MQ=255) cGCCCAT‑AACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAg > 1:2705441/1‑69 (MQ=255) gCCCATAAACCGTTTATTGTGTTCATAACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAgg < 1:5452159/70‑1 (MQ=255) cccATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCg < 1:3713005/71‑1 (MQ=255) ccATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGa < 1:4011413/60‑1 (MQ=255) ccATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTg < 1:3786817/64‑1 (MQ=255) aaacgcctccagttcaaacgcttctACCGCGTGGAAAGAACATGCGGTa < 1:1892366‑M1/24‑1 (MQ=255) cATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGa < 1:1452115/65‑1 (MQ=255) cATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGtt > 1:3812886/1‑71 (MQ=255) cATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGtt > 1:3460765/1‑71 (MQ=255) aTAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTa > 1:6553108/1‑47 (MQ=255) aTAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAg < 1:3406030/51‑1 (MQ=255) aTAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAAc > 1:5243713/1‑60 (MQ=255) aTAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGa > 1:4651890/1‑64 (MQ=255) aTAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGttt > 1:2167259/1‑71 (MQ=255) cgcctccagttcaaacgcttctACCGCGTGGAAAGAAc < 1:267110‑M1/16‑1 (MQ=255) cgcctccagttcaaacgcttctACCGCGTGGAAAGAAc < 1:452640‑M1/16‑1 (MQ=255) aaaCCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTg > 1:6493821/1‑70 (MQ=255) aaCCGTTTATTGTGTTCATCACCGCGTGGAAAGAAc > 1:3344582/1‑36 (MQ=255) aaCCGTTTATTGTGTTCATCACCGCGTGGAAAGAAc > 1:6200074/1‑36 (MQ=255) aaCCGTTTATTGTGTTCATCACCGCGTGGAAAGAAc > 1:289550/1‑36 (MQ=255) aaCCGTTTATTGTGTTCATCACC‑CGTGGAAAGAAc > 1:5982011/1‑35 (MQ=38) aCCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGc < 1:5915516/48‑1 (MQ=255) aCCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACt < 1:2198674/71‑1 (MQ=255) cGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGaa < 1:720233/53‑1 (MQ=255) cGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGaa < 1:1809009/53‑1 (MQ=255) tttATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGt > 1:6815170/1‑46 (MQ=255) tttATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGt > 1:5366014/1‑46 (MQ=255) ttATTGTGTTCATCACTGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACAt > 1:473891/1‑70 (MQ=255) tATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTa > 1:772925/1‑37 (MQ=255) tATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTa > 1:7485303/1‑37 (MQ=255) tATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTg < 1:1522934/47‑1 (MQ=255) tgtTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGATCTGGAGGCGTTTGCCt > 1:1804713/1‑60 (MQ=255) tgtTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCaaa > 1:1285802/1‑71 (MQ=255) tgtTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTAAATTCTCaaa > 1:520972/1‑71 (MQ=255) ttCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAAcc > 1:2244220/1‑71 (MQ=255) ttCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAAcc > 1:3762949/1‑71 (MQ=255) atcaCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGt < 1:7115344/70‑1 (MQ=255) tcaCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTg < 1:359103/36‑1 (MQ=255) tcaCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTAt < 1:80289/71‑1 (MQ=255) caCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGaa > 1:4677806/1‑37 (MQ=255) caCCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGaa > 1:7264380/1‑37 (MQ=255) caCCGCGTGGAAAGAACATGCGGTAGAAGAGTTTGaa > 1:7103187/1‑37 (MQ=255) ACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTAc < 1:3643553‑M1/54‑1 (MQ=255) ACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATc > 1:2001347‑M1/1‑70 (MQ=255) ACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCa > 1:53026‑M1/1‑71 (MQ=255) ACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCa > 1:813057‑M1/1‑71 (MQ=255) | GTCGCTGGATGGCGTGTTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCA > AP009048/2505999‑2506139 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |