| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3711929 | 100 (1.230) | 11 (0.150) | 5/90 | NT | 11.1% | coding (882/1890 nt) | gidA | glucose‑inhibited cell‑division protein |
| ? | AP009048 | = 3711950 | 84 (1.120) | coding (903/1890 nt) | gidA | glucose‑inhibited cell‑division protein | |||||
Only 100 of 154 total aligned reads displayed.
GGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGCCGT > AP009048/3711864‑3711999 | ggCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCtt < 1:7552112/71‑1 (MQ=255)ggCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCt < 1:2234023/70‑1 (MQ=255) cccACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAG < 1:6675219‑M1/64‑1 (MQ=255) ccACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGtccttccg > 1:5240176‑M1/1‑63 (MQ=255) ccACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGa < 1:3972287/64‑1 (MQ=255) ccACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGa < 1:331511/64‑1 (MQ=255) ccACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCt < 1:3097931/71‑1 (MQ=255) cACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCtt > 1:4144330/1‑71 (MQ=255) aCGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATc > 1:830236/1‑64 (MQ=255) aCGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTcc < 1:5747729/68‑1 (MQ=255) aCGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTcc < 1:7792798/68‑1 (MQ=255) cGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCtt > 1:4004111/1‑69 (MQ=255) cGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTg < 1:6843115/70‑1 (MQ=255) cGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTg > 1:244173/1‑70 (MQ=255) tACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAAcc > 1:2537128/1‑71 (MQ=255) cccGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg > 1:5062439/1‑71 (MQ=255) cccGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg > 1:5065228/1‑71 (MQ=255) cccGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg > 1:6846121/1‑71 (MQ=255) ccGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg > 1:7231777/1‑70 (MQ=255) gTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGAc > 1:2865870‑M2/1‑70 (MQ=255) tcgatcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGtccttccggttcaaggaagatct < 1:4458976‑M1/71‑24 (MQ=255) tcgatcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCgg < 1:5643035/64‑1 (MQ=255) tcgaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTcc < 1:6264067/51‑1 (MQ=255) gaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGa < 1:3812998/53‑1 (MQ=255) gaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGa < 1:3190614/53‑1 (MQ=255) gaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGActg > 1:4761188‑M2/1‑63 (MQ=255) gaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACctc > 1:2107668/1‑71 (MQ=255) gaAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACctc > 1:7770867/1‑71 (MQ=255) aaGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGa < 1:3284888/58‑1 (MQ=255) aaGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:6624591/60‑1 (MQ=255) aaGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:417699/60‑1 (MQ=255) aaGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:7483802/60‑1 (MQ=255) aaGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGAc < 1:4555560/67‑1 (MQ=255) aaGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCCGAAg < 1:907559/60‑1 (MQ=255) aGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:6487116/59‑1 (MQ=255) aGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:6620787/59‑1 (MQ=255) aGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGa > 1:4055356/1‑61 (MQ=255) gACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg > 1:3380967/1‑58 (MQ=255) gACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTaa > 1:3226698/1‑71 (MQ=255) gACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTaa > 1:3984001/1‑71 (MQ=255) aCAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGAt < 1:1571683/40‑1 (MQ=255) aCAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGa > 1:2427317/1‑49 (MQ=255) aCAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGa < 1:3677365/55‑1 (MQ=255) aCAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGa < 1:3438289/55‑1 (MQ=255) aCAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGa < 1:1173880/59‑1 (MQ=255) cAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAAt > 1:18230/1‑70 (MQ=255) cAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAAt > 1:5299391/1‑70 (MQ=255) aaaGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATg > 1:3917474/1‑70 (MQ=255) aaaGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATg > 1:3524340/1‑70 (MQ=255) aaaGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGa < 1:1328300/71‑1 (MQ=255) aGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGaaa < 1:4278487/71‑1 (MQ=255) gTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGa > 1:5428409/1‑50 (MQ=255) tCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTg < 1:7536348/42‑1 (MQ=255) tCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTg < 1:834591/42‑1 (MQ=255) tCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAAtt < 1:6762198/71‑1 (MQ=255) tCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAAtt < 1:4757769/71‑1 (MQ=255) tCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAAtt < 1:4766647/71‑1 (MQ=255) cATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAg < 1:173491/50‑1 (MQ=255) aTGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTa > 1:6488078/1‑71 (MQ=255) tGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTa < 1:7204609/70‑1 (MQ=255) tGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTAt < 1:5641892/71‑1 (MQ=255) gcTTCGCCGACAGAAATCAGCATCAGATCTTCCTTg < 1:5146814/36‑1 (MQ=255) gcTTCGCCGACAGAAATCAGCATCAGATCTTCCTTg < 1:4756303/36‑1 (MQ=255) cTTCGCCGACAGAAATCAGCATCAGtccttccggttcaaggaagatct > 1:3387036‑M1/1‑25 (MQ=255) cTTCGCCGACAGAAATCAGCATCAGtccttccggttcaaggaagatct > 1:7023739‑M1/1‑25 (MQ=255) cTTCGCCGACAGAAATCAGCATCAGtccttccggttcaaggaagatct > 1:5990228‑M1/1‑25 (MQ=255) ttCGCCGACAGAAATCAGCATCAGtccttccggttcaaggaaga < 1:435658‑M1/44‑21 (MQ=255) ttCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCgg < 1:101520/40‑1 (MQ=255) cGCCGACAGAAATCAGCATCAGtccttccggttcaaggaagatc > 1:2272880‑M1/1‑22 (MQ=255) cGCCGACAGAAATCAGCATCAGtccttccggttcaaggaagatc > 1:2932156‑M1/1‑22 (MQ=255) cGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGaa < 1:2645913/69‑1 (MQ=255) cGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGaa < 1:7670226/69‑1 (MQ=255) cGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACg > 1:1961159/1‑71 (MQ=255) cGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACg > 1:6155346/1‑71 (MQ=255) cGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACg > 1:3670029/1‑71 (MQ=255) ccGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGt < 1:1191043/71‑1 (MQ=255) ccGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGt < 1:3888824/71‑1 (MQ=255) cGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGt < 1:1817413/70‑1 (MQ=255) gAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTcc < 1:1502203/71‑1 (MQ=255) aaaTCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATcc < 1:3799467/57‑1 (MQ=255) aaTCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACctc < 1:481593/41‑1 (MQ=255) tCAGATCTTCCTTGAACCTGAAGGACTGACCTCTAATGAAATTTATCAGAACGGTATCTCCACCAGCCTGc > 1:5912708/1‑71 (MQ=255) tCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTAt < 1:6114838/57‑1 (MQ=255) tCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGc > 1:5816480/1‑71 (MQ=255) cAGtccttccggttcaaggaagatctgatgctgatttctgtcggcgaagcgcatgacttt > 1:1570706‑M1/1‑3 (MQ=255) cAGtccttccggttcaaggaagatctgatgctgatttctgtcggcgaagcgcatgacttt > 1:3802810‑M1/1‑3 (MQ=255) cAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGa < 1:4633890/49‑1 (MQ=255) cAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGcc > 1:5383526/1‑71 (MQ=255) aGtccttccggttcaaggaagatctgatgctgatttctgtcggcgaag > 1:435273‑M1/1‑2 (MQ=255) aGATCTTCCTTGAACCGGAAGGActgatgctgatttctgtcggcgaagcgcatgactttgtcttcgatcga < 1:4458976‑M2/71‑49 (MQ=255) aGATCTTCCTTGAACCGGAAGGActgatgctgatttctgtcggcgaagcgcatgactttgtcttcgatcga < 1:5836514‑M2/71‑49 (MQ=255) aGATCTTCCTTGAACCGGAAGGActgatgctgatttctgtcggcgaag > 1:7023739‑M2/1‑23 (MQ=255) aGATCTTCCTTGAACCGGAAGGActgatgctgatttctgtcggcgaag > 1:5990228‑M2/1‑23 (MQ=255) aGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATc > 1:1334971/1‑45 (MQ=255) aGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGCCg < 1:7758744/71‑1 (MQ=255) gtccttccggttcaaggaagatctgatgctgatttctgtcggcgaagcgcatgactttgtcttcgatcgac > 1:2865870‑M1/1‑1 (MQ=255) gATCTTCCTTGAACCGGAAGGActgatgctgatttctgtcggcg > 1:2932156‑M2/1‑22 (MQ=255) gATCTTCCTTGAACCGGAAGGActgatgctgatttctgtcggcg > 1:2272880‑M2/1‑22 (MQ=255) gATCTTCCTTGAACCGGAAGGActgatgctgatttctgtcggcg > 1:476792‑M2/1‑22 (MQ=255) gATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGa < 1:101650/47‑1 (MQ=255) | GGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGCCGT > AP009048/3711864‑3711999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |