| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 179439 = | 50 (0.610) | 3 (0.040) | 3/88 | NT | 7.3% | coding (203/1518 nt) | dgt | deoxyguanosine triphosphate triphosphohydrolase |
| ? | AP009048 | 179467 = | 31 (0.420) | coding (231/1518 nt) | dgt | deoxyguanosine triphosphate triphosphohydrolase | |||||
TTTTTCCACTGGAGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATACGGCCTGGATG > AP009048/179397‑179537 | tttttCCACTGGAGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTgggg < 1:4970300/71‑1 (MQ=255) ttttCCACTGGAGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGgc > 1:3946275/1‑71 (MQ=255) ccACTGGAGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTa > 1:7550789/1‑71 (MQ=255) cACTGGAGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCt > 1:4500872/1‑69 (MQ=255) tGGAGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTgggg < 1:264626/62‑1 (MQ=255) tGGAGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATc > 1:5226849/1‑71 (MQ=255) aGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGc > 1:758578/1‑70 (MQ=255) gcgcAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCa < 1:2752455/71‑1 (MQ=255) gcgcAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCa < 1:2733166/71‑1 (MQ=255) gcgcAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCa < 1:7316193/71‑1 (MQ=255) ggaaTGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCa > 1:2623168/3‑69 (MQ=255) cgccgTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAAttt > 1:6684009/1‑71 (MQ=255) gccgTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAAtttt < 1:6823833/71‑1 (MQ=255) gccgTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAAttt > 1:2463043/1‑70 (MQ=255) cgTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAAtttt > 1:5378023/1‑69 (MQ=255) gTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAAtt > 1:7403919/1‑66 (MQ=255) tGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGc > 1:2200424/1‑71 (MQ=255) tGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGc > 1:2085879/1‑71 (MQ=255) gcgcACGCGTCTTACCCACTCGATGGAAGTCCAGCATGTGGGGCGCTACATCGCCAAAGAAATTTTAAGcc > 1:5098174/1‑71 (MQ=255) aCGCGTCTTAACCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAg > 1:6252911/1‑65 (MQ=255) gcgTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGa < 1:481467/71‑1 (MQ=255) tCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAAtt < 1:1984005/55‑1 (MQ=255) tACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCg < 1:1689604/60‑1 (MQ=255) CCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCtt < 1:4756483‑M1/70‑1 (MQ=255) cacctgctggacttccatcgagtgggGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTa > 1:3154612‑M2/27‑70 (MQ=255) ACTCGATGGAAGTCCAGCAGGTGGGGCGCTATATCGCCAAAGaaa < 1:7186148‑M1/45‑1 (MQ=255) ACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGaaa < 1:3900263‑M1/45‑1 (MQ=255) ACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTaaa < 1:4477811‑M1/71‑1 (MQ=255) cctgctggacttccatcgagtgggGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAAt > 1:187537‑M2/25‑71 (MQ=255) CTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGaaa > 1:2562325‑M1/1‑44 (MQ=255) CTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGaaa > 1:4049486‑M1/1‑44 (MQ=255) tCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGa < 1:1416926/58‑1 (MQ=255) cGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCt > 1:2347030/1‑55 (MQ=255) cGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTa > 1:193445/1‑71 (MQ=255) gctggacttccatcgagtgggGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTa < 1:1563374‑M2/49‑1 (MQ=255) aTGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACt > 1:3072186/1‑71 (MQ=255) tGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTaa < 1:7652707/64‑1 (MQ=255) ggAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTaa > 1:2027626/1‑44 (MQ=255) gAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTaa < 1:1987115/62‑1 (MQ=255) aGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAAt > 1:2135984/1‑36 (MQ=255) tCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGa < 1:5628208/48‑1 (MQ=255) ccAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCa > 1:6333687/1‑70 (MQ=255) cagcagGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATa > 1:858269/1‑71 (MQ=255) cagcagGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATa < 1:2351908/71‑1 (MQ=255) gcagGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTc > 1:2821327/1‑41 (MQ=255) gcagGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATACg < 1:479962/71‑1 (MQ=255) gcagGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATACg > 1:5228252/1‑71 (MQ=255) gcagGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATACg > 1:515321/1‑71 (MQ=255) cagGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATACgg > 1:220503/1‑71 (MQ=255) ggTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTc < 1:6038253/38‑1 (MQ=255) ggTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTc < 1:1646698/38‑1 (MQ=255) gGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTgg < 1:2452939‑M2/53‑1 (MQ=255) gGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATACGGCCTGGAt < 1:6523326‑M2/70‑1 (MQ=255) gcgcTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATACGGCCTGGATg < 1:7711624/71‑1 (MQ=255) | TTTTTCCACTGGAGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATACGGCCTGGATG > AP009048/179397‑179537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |