| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3064697 | 156 (1.920) | 18 (0.230) | 8/94 | NT | 11.2% | coding (1240/1479 nt) | ygfH | propionyl‑CoA:succinate‑CoA transferase |
| ? | AP009048 | = 3064731 | 136 (1.740) | coding (1274/1479 nt) | ygfH | propionyl‑CoA:succinate‑CoA transferase | |||||
Only 100 of 187 total aligned reads displayed.
GGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTATCATTGATAA > AP009048/3064661‑3064800 | aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGatcat < 1:7260112/68‑1 (MQ=255) aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGatcat < 1:2100095/68‑1 (MQ=255) aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGatcat < 1:1625331/68‑1 (MQ=255) aaGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGatcat < 1:4301910/68‑1 (MQ=255) aGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAcc > 1:3770627/1‑71 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAcc > 1:3593375/1‑70 (MQ=255) gATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCg < 1:3055389/71‑1 (MQ=255) tctcAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGaa > 1:1124262/1‑71 (MQ=255) tctcAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGaa > 1:7568420/1‑71 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATc < 1:1429741‑M2/61‑2 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACaa < 1:3194960/70‑1 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACa < 1:3078446/69‑1 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACa < 1:1057502/69‑1 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACa < 1:7850306/69‑1 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAg > 1:3537272/1‑71 (MQ=255) aaCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAg > 1:4987035/1‑71 (MQ=255) aCCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAgg > 1:1493079/1‑71 (MQ=255) ccGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAggg < 1:6657545/71‑1 (MQ=255) ccGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAggg < 1:6989178/71‑1 (MQ=255) ccGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAggg < 1:6074499/71‑1 (MQ=255) ccGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAgg > 1:325347/1‑70 (MQ=255) ccGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAgg > 1:2812584/1‑70 (MQ=255) ccGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAgg > 1:4104023/1‑70 (MQ=255) tcgtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATc > 1:2564682/1‑71 (MQ=255) gtGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGAttg < 1:6688541/70‑3 (MQ=255) ccAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCAcc > 1:960963/1‑54 (MQ=255) ccAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGa < 1:5200439/71‑1 (MQ=255) cAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGAt < 1:1339890/71‑1 (MQ=255) aTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATc > 1:3294831/1‑63 (MQ=255) aTGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCgc > 1:2284919/1‑67 (MQ=255) tgtgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCt < 1:5015517/70‑1 (MQ=255) tgtgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTg < 1:291964/71‑1 (MQ=255) tgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAg > 1:5735353/1‑55 (MQ=255) tgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAg > 1:2569111/1‑55 (MQ=255) tgCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAg > 1:4477615/1‑55 (MQ=255) gCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAAc < 1:5422480/51‑1 (MQ=255) gCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACa < 1:4265390/52‑1 (MQ=255) gCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTgcgc > 1:7634405/1‑71 (MQ=255) cAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGcgcg < 1:1531630/71‑1 (MQ=255) cAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGcgcg < 1:6595306/71‑1 (MQ=255) cAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGcgcg > 1:2001895/1‑71 (MQ=255) cAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGcgcg < 1:6475874/71‑1 (MQ=255) aGCCATGTTGATCACAGCGAACACACCGTCAAAGTGATCATCACCGAACAAGGGATCGcc > 1:1884869/1‑60 (MQ=255) gCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATcatggctgcacattggcacgacggtt < 1:5903310‑M2/66‑27 (MQ=255) gCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGt < 1:2796518/71‑1 (MQ=255) aTGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCg > 1:5096137/1‑57 (MQ=255) aTGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCtt < 1:2033271/71‑1 (MQ=255) aTGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCtt < 1:740681/71‑1 (MQ=255) tGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCttt < 1:6745494/71‑1 (MQ=255) gTTGATCACAGCGAACACAGCGTCAAAGTGATCATcatggctgcacattggcacgacggttgagatcttgc < 1:3275719‑M2/71‑37 (MQ=255) gTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTc > 1:7785059/1‑71 (MQ=255) ttGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAg < 1:846782/45‑1 (MQ=255) ttGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTc < 1:78598/70‑1 (MQ=255) tGATCACAGCGAACACAGCGTCAAAGTGATCAAcatggctgcacattggcacgacggttgagatcttgcct < 1:5773247‑M2/71‑39 (MQ=255) tGATCACAGCGAACACAGCGTCAAAGTGATCAAcatggctgcacattggcacgacggttgagatc > 1:5449321‑M2/1‑33 (MQ=255) gATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTccc < 1:5258866/70‑1 (MQ=255) acaGCGAACACAGCGTCAAAGTGATCATcatggctgcacattggcacgacggttg > 1:7688538‑M2/1‑28 (MQ=255) acaGCGAACACAGCGTCAAAGTGATCATcatggctgcacattggcacgacggttg > 1:5613768‑M2/1‑28 (MQ=255) acaGCGAACACAGCGTCAAAGTGATCATcatggctgcacattggcacgacggttg > 1:1105185‑M2/1‑28 (MQ=255) acaGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGAt > 1:7226724/1‑50 (MQ=255) acaGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGAt > 1:463927/1‑50 (MQ=255) caGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCtt > 1:1694474/1‑70 (MQ=255) caGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTc < 1:1178676/71‑1 (MQ=255) caGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTc < 1:4849304/71‑1 (MQ=255) aGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCa < 1:2731482/71‑1 (MQ=255) cGAACACAGCGTCAAAGTGATCATCACCGAACAAggg > 1:7363875/1‑37 (MQ=255) cGAACACAGCGTCAAAGTGATCATCACCGAACAAggg > 1:7660350/1‑37 (MQ=255) cGAACACAGCGTCAAAGTGATCATCACCGAACAAggg > 1:1830729/1‑37 (MQ=255) cGAACACAGCGTCAAAGTGATCATCACCGAACAAggg > 1:4419143/1‑37 (MQ=255) cGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAAc < 1:3382563/71‑1 (MQ=255) acacAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTc < 1:1306227/65‑1 (MQ=255) acacAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAAcgcg < 1:4601046/71‑1 (MQ=255) acacAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAAcgcg < 1:267596/71‑1 (MQ=255) cacaGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACgcgc < 1:5269720/71‑1 (MQ=255) acaGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCaa > 1:7095571/1‑65 (MQ=255) acaGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCaa > 1:7105010/1‑65 (MQ=255) caGCGTCAAAGTGATCATcatggctgcacattggcacgacggtt < 1:3905189‑M2/44‑27 (MQ=255) aGCGTCAAAGTGATCATCACCGAACAAGGGATCGcc < 1:2071568/36‑1 (MQ=255) cGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTccc > 1:1977531/1‑53 (MQ=255) cGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTccc > 1:5362897/1‑53 (MQ=255) gTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAAc < 1:5161387/61‑1 (MQ=255) gTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAAc < 1:2164913/61‑1 (MQ=255) gTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAAc < 1:553244/61‑1 (MQ=255) cAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTa > 1:1290422/1‑71 (MQ=255) aaaGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCaa > 1:4854125/1‑57 (MQ=255) aaaGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTAt > 1:6434907/1‑71 (MQ=255) aaaGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTAt < 1:6891589/71‑1 (MQ=255) aaaGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTAt < 1:7350000/71‑1 (MQ=255) aaGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCTGTCttt < 1:3332536/45‑1 (MQ=255) aGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGt > 1:3824643/1‑40 (MQ=255) gTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTa < 1:2435123/67‑1 (MQ=255) gTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTa < 1:6029517/67‑1 (MQ=255) gATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTATCAtt > 1:5694017/1‑70 (MQ=255) catcaCCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGc > 1:4513609/1‑44 (MQ=255) atcaCCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTATCATTGATaa < 1:2357872/71‑1 (MQ=255) atcaCCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTATCATTGATaa < 1:6735247/71‑1 (MQ=255) atcaCCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTATCATTGATaa < 1:4182701/71‑1 (MQ=255) tcaCCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCtt < 1:3660433/44‑1 (MQ=255) tcaCCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCtt < 1:6265892/44‑1 (MQ=255) tcaCAGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACgcgc > 1:492003/1‑52 (MQ=255) | GGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTATCATTGATAA > AP009048/3064661‑3064800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |