| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 19620 = | 64 (1.040) | 7 (0.130) +GTGACT |
3/86 | NT | 11.6% | coding (536/942 nt) | ribF | bifunctional riboflavin kinase and FAD synthetase |
| ? | Exported | = 2548513 | 58 (0.940) | coding (722/858 nt) | htrL | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CCAGTAAACTCTCTGCCAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/19640‑19620‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACATGACAAAAA < Exported/2548513‑2548501 |||||| tgAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAA < 1:3852700/38‑1 gAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAA > 1:2325791/2‑39 gAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAA > 1:3497478/2‑39 AGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAA > 1:1293542/1‑38 AGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAA < 1:1612156/38‑1 AGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAA < 1:2651763/38‑1 AGTAAACTCTCAGTCAGAGGTGACTCACATGACAAA < 1:5357655/36‑1 |||||| CCAGTAAACTCTCTGCCAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/19640‑19620‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACATGACAAAAA < Exported/2548513‑2548501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |