| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 477242 = | 51 (0.830) | 12 (0.260) +CAAAGGTAAAAT |
3/74 | NT | 24.1% | intergenic (+176/‑671) | mngB/cydA | alpha‑mannosidase/cytochrome d terminal oxidase, subunit I |
| ? | Exported | 1746968 = | 50 (0.810) | intergenic (+52/+157) | srmB/yfiE | ATP‑dependent RNA helicase/predicted DNA‑binding transcriptional regulator | |||||
CGTGGCTTGAGAGTGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/477260‑477242‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGT > Exported/1746968‑1747034 |||||||||||| cgcGGCTTGAGACTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTA > 1:2086626/4‑60 gcGGCTTGAGACTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGC < 1:4351900/69‑1 gcGGCTTGAGACTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGC < 1:2736229/69‑1 gcGGCTTGAGACTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGC < 1:3883591/69‑1 gcGGCTTGAGACTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCA > 1:3714582/3‑53 gcGGCTTGAGACTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCA > 1:5023272/3‑53 gcGGCTTGAGACTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCA > 1:4223045/3‑53 gcGGCTTGAGACTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCA > 1:2247114/3‑53 cGGCTTGAGACTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCA < 1:4894872/70‑1 gacTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAA > 1:3005596/4‑64 acTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAATGTATTGA < 1:2818381/69‑1 acTGATGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAATGTATTGA < 1:2292355/69‑1 tGACAAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAATGTATTGAATTTG < 1:1024386/70‑1 AAAGGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAA > 1:3650503/1‑54 GTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAATGTATTGAATTT < 1:289721/62‑1 GTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAATGTATTGAA < 1:1234328/59‑1 AAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAATGTATTGAATTTGCAC > 1:4841015/1‑64 AAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAATGTATTGAATTTGC > 1:4729318/1‑62 AAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAATGTATTGAATT > 1:392972/1‑59 AAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAATGTATTGAATTTGCACGCTTTTGT < 1:3822201/71‑1 |||||||||||| CGTGGCTTGAGAGTGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/477260‑477242‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGT > Exported/1746968‑1747034 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |