| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 937260 = | 43 (0.700) | 13 (0.230) +GAT |
6/92 | NT | 18.9% | intergenic (+166/+241) | fdnI/yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/predicted DNA‑binding transcriptional regulator |
| ? | Exported | 1716817 = | 76 (1.240) | intergenic (+75/+123) | yphH/glyA | predicted DNA‑binding transcriptional regulator/serine hydroxymethyltransferase | |||||
CTGATGACAAACGCAACATTGCCTGATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/937290‑937260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTT > Exported/1716817‑1716885 ||| CTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGG < 1:4414518/44‑1CTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGG < 1:3141518/44‑1 GATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGG > 1:2904041/1‑42 agcTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTG < 1:334856/67‑1 agcTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTG < 1:345139/67‑1 agcTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTG > 1:4318637/4‑60 gcTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTG > 1:100149/3‑69 TTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATA < 1:829910/46‑1 GCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATA > 1:3719605/1‑46 GCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATA > 1:24882/1‑46 ATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATA < 1:276209/71‑1 ATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATA < 1:5482606/71‑1 ATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCA > 1:4517591/1‑36 TGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTG < 1:303370/59‑1 TGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTG < 1:5484282/59‑1 CGCGATGCTTATCAGGCCTACCAGAAGATTGCAATA > 1:4175209/1‑36 CGATGCTTATCAGGCCTACA‑GAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGT < 1:2714889/71‑1 ATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTT < 1:5031911/52‑1 ATGCTTATCAGGCCTACCAGAAGATAGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTT < 1:4203362/71‑1 ||| CTGATGACAAACGCAACATTGCCTGATGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/937290‑937260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTT > Exported/1716817‑1716885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |