| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1602585 = | 47 (0.770) | 55 (1.230) +TGGCGCAAGAATC |
29/72 | NT | 62.1% | intergenic (+121/+119) | yfeW/yfeX | predicted periplasmic esterase/conserved hypothetical protein |
| ? | Exported | = 1687685 | 45 (0.730) | intergenic (‑66/+76) | sseB/pepB | rhodanase‑like enzyme, sulfur transfer from thiosulfate/aminopeptidase B | |||||
GTTGTACACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1602630‑1602585‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCGCC < Exported/1687685‑1687647 ||||||||||||| caTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGA > 1:769987/3‑70 aTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATA < 1:768055/70‑1 ttGCCGGTTGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTG < 1:2715978/52‑1 ttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTA < 1:4788693/69‑1 tGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATA < 1:1179752/63‑1 tGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATA < 1:591948/63‑1 tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAAT‑TGTAGGCCTGATAAGCGTAGC > 1:2570550/2‑71 tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCG < 1:73329/67‑1 GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAAT‑TGTAGGCCTGATAAGCGTAGC > 1:5620472/1‑70 GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCG < 1:3955404/67‑1 GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGTGCGGGAATTTGTAGGCCTGA > 1:4522534/1‑61 GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGTGCGGGAATTTGTAGGCCTGA > 1:3267046/1‑61 CCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCG > 1:3046333/1‑71 CCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAA > 1:3392862/1‑63 CCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAA > 1:4501568/1‑47 CCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAAT‑TGTAGGCCTGATAAGCGTAGCG < 1:3979161/70‑1 CGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGC < 1:534969/71‑1 CGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGA < 1:4204713/59‑1 CGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGA < 1:2144493/59‑1 GGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATA > 1:1181507/1‑60 GATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTA > 1:2597924/1‑50 GATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAG < 1:1625640/51‑1 GATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAA < 1:2807260/60‑1 GATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT > 1:1533701/1‑71 GATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTG < 1:4403124/48‑1 ATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATC < 1:3279022/71‑1 ATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATC < 1:3601042/71‑1 TGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCAT > 1:884991/1‑69 TGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAAT‑TGTAGGCCTGATAAGCGTAGCGCATCAG > 1:4201390/1‑71 TGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAAT‑TGTAGGCCTGATAAGCGTAGCGCATCAG > 1:4208134/1‑71 TGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTG < 1:4790849/46‑1 TGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTG < 1:315120/46‑1 TGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTG < 1:3579973/46‑1 TGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAA < 1:2060699/39‑1 GCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAG > 1:2867373/1‑71 GCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTA > 1:5399880/1‑47 GCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATA > 1:2548375/1‑56 GCGGCGTGAACGCCTTATCCGGCCTACGAATGGCACAA < 1:1444150/38‑1 CGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGG > 1:5410137/1‑71 CGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGG > 1:4313221/1‑71 CGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGG > 1:77811/1‑71 CGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATC < 1:870899/42‑1 GGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAA < 1:2525628/39‑1 GCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTTTAGGCCTGATAAGCGTAGCGCATCAGGCA < 1:711982/71‑1 CGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAT < 1:5272066/71‑1 CGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAT > 1:2084738/1‑71 CGTGAAAGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAT > 1:9523/1‑71 GTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAT > 1:2198300/1‑70 tggACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTT < 1:4713640/68‑1 TGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTT < 1:4205089/71‑1 TGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTG < 1:3717949/39‑1 AACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGC < 1:3459302/71‑1 AACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGC < 1:2019165/71‑1 CGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGaca > 1:1139451/1‑68 CGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCca > 1:2012125/1‑69 GCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCcac > 1:3298991/1‑68 TTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGC < 1:847727/59‑1 TTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGC < 1:545159/59‑1 TATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGt > 1:2427606/1‑63 TATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGG < 1:4043861/57‑1 CCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGAT < 1:4443203/37‑1 CGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTA > 1:5606946/1‑43 TACGAGTGGCGCGAGAAT‑TGTAGGCCTGATAAGCGTAGCGCAT < 1:2265395/43‑1 TACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGC < 1:3622469/55‑1 TACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCA < 1:921575/46‑1 TACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGC < 1:3864489/42‑1 TACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGC < 1:535221/42‑1 TACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGC < 1:2108340/42‑1 TACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGC < 1:1525568/42‑1 CGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGC > 1:1097183/1‑40 CGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGC > 1:4861843/1‑40 CGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGC > 1:128995/1‑40 CGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGC > 1:1371043/1‑40 CGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGC > 1:1990829/1‑40 CGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGC > 1:2934080/1‑53 CGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGC > 1:2927651/1‑53 CGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGC > 1:2527107/1‑53 GAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAG > 1:2081101/1‑36 GAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAG > 1:2413192/1‑36 AATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCA > 1:4864417/1‑39 aGGCGCGAGAAT‑TGTAGGCCTGATAAGCGTAGCGCATC > 1:3367208/2‑38 TGGCGCGAGAAT‑TGTAGGCCTGATAAGCGTAGCGCATC > 1:1937950/1‑38 GAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCc < 1:5260775/42‑2 ||||||||||||| GTTGTACACGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1602630‑1602585‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGCGCC < Exported/1687685‑1687647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |