| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 5671 | 82 (1.340) | 42 (0.750) | 27/90 | NT | 49.1% | intergenic (+141/+12) | yaaX/yaaA | hypothetical protein/conserved hypothetical protein |
| ? | Exported | 2094909 = | 12 (0.210) | intergenic (‑58/+394) | tdcG/rnpB | L‑serine dehydratase 3/RNase P | |||||
Only 100 of 156 total aligned reads displayed.
TTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCAT > Exported/5602‑5738 | ttAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAtt < 1:4113015/71‑1 (MQ=255)ttAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAtt > 1:3747856/1‑71 (MQ=255)ttAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAtt > 1:2146278/1‑71 (MQ=255)ttAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAtt < 1:1825340/71‑1 (MQ=255)ttAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAtt > 1:1654681/1‑71 (MQ=255) aaTTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTg > 1:5380938/1‑70 (MQ=255) aaTTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGa > 1:5387744/1‑71 (MQ=255) tGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataa < 1:5640649‑M1/69‑7 (MQ=255) tGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataa < 1:162167‑M1/69‑7 (MQ=255) cAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcg > 1:5612008‑M1/1‑61 (MQ=255) cAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcg < 1:3860884‑M1/71‑11 (MQ=255) cAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaa < 1:2088042‑M1/68‑8 (MQ=255) tatatTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATga > 1:5604673‑M1/1‑58 (MQ=255) tatatTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCa < 1:110977/66‑1 (MQ=255) tatatTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCa < 1:4012164/66‑1 (MQ=255) tatatTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACt > 1:284536/1‑70 (MQ=255) tatTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactc < 1:2571599‑M1/71‑16 (MQ=255) tatTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcact > 1:1579168‑M1/1‑56 (MQ=255) tatTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcact > 1:637586‑M1/1‑56 (MQ=255) ttGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAAc > 1:1645072/1‑70 (MQ=255) tGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaa > 1:1531146‑M1/1‑53 (MQ=255) tGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaa > 1:526587‑M1/1‑53 (MQ=255) aaTTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaata < 1:1233799‑M1/56‑6 (MQ=255) aaTTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaata < 1:4928258‑M1/56‑6 (MQ=255) aaTCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctg > 1:3503473/1‑71 (MQ=255) tGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaacaatct < 1:5064246‑M1/70‑24 (MQ=255) tGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAtt < 1:3312909/48‑1 (MQ=255) tGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAtt < 1:420100/48‑1 (MQ=255) tGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACtt < 1:2492083/60‑1 (MQ=255) cATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGt < 1:802464/70‑1 (MQ=255) cATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGt < 1:1482905/70‑1 (MQ=255) tGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCaa < 1:3471210/52‑1 (MQ=255) gCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacc > 1:1567246‑M1/1‑42 (MQ=255) gCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacc > 1:4406691‑M1/1‑42 (MQ=255) gCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctgct < 1:412784/64‑1 (MQ=255) gCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctgct < 1:119687/64‑1 (MQ=255) gCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctgct < 1:5654762/64‑1 (MQ=255) cTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGt > 1:5187150/1‑71 (MQ=255) cTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGAATTGACTGCAAACTTAACGCTGCTCGTAGCGt > 1:2244643/1‑71 (MQ=255) ttttGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccg > 1:4762478‑M1/1‑40 (MQ=255) ttGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGttt < 1:3102514/70‑1 (MQ=255) tGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTa < 1:1344445/70‑1 (MQ=255) tGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTa < 1:4063635/70‑1 (MQ=255) gTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTaaa > 1:4483343/1‑71 (MQ=255) ggCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaac > 1:1368239‑M1/1‑33 (MQ=255) ggCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAacac > 1:3978760/1‑71 (MQ=255) gCAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacg < 1:1289997‑M1/71‑40 (MQ=255) cAGGATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacgg > 1:2663268‑M1/1‑31 (MQ=255) ggATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGt < 1:5235591/71‑1 (MQ=255) gttAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAacac < 1:5515514/64‑1 (MQ=255) gATAAGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggtt < 1:4149936‑M1/70‑43 (MQ=255) aTAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTc > 1:5275114/1‑71 (MQ=255) tAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCg > 1:4467445/1‑71 (MQ=255) aaGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCg > 1:369673/1‑70 (MQ=255) aGGCGTTCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccgg < 1:3803423‑M1/59‑36 (MQ=255) aGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGcc < 1:4395052/71‑1 (MQ=255) ggCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCa < 1:1536369/71‑1 (MQ=255) gTTCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggtttattacgta < 1:2389227‑M1/71‑52 (MQ=255) ttCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggtttattacgta < 1:3162225‑M1/70‑52 (MQ=255) ttCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggt < 1:3271916‑M1/60‑42 (MQ=255) ttCACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggt < 1:4743280‑M1/60‑42 (MQ=255) tCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCt > 1:547577/1‑71 (MQ=255) tCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCt > 1:1619740/1‑71 (MQ=255) tCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACAAGTTCGCCATTGCt > 1:1297473/1‑71 (MQ=255) cACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggtttattacgtacat > 1:3859559‑M1/1‑17 (MQ=255) cACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggtttat > 1:646565‑M1/1‑17 (MQ=255) cACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaa > 1:685520‑M1/1‑17 (MQ=255) cACGCCGCATCCGGCATgaataaagcgcactcaacaatctgaaa > 1:734648‑M1/1‑17 (MQ=255) cACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCg > 1:4534283/1‑41 (MQ=255) cACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCa > 1:831630/1‑57 (MQ=255) cACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCt > 1:3774621/1‑70 (MQ=255) cACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTg > 1:4837537/1‑71 (MQ=255) cACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTg > 1:108566/1‑71 (MQ=255) aCGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTg > 1:4168150/1‑70 (MQ=255) aCGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTg > 1:5568345/1‑70 (MQ=255) cgcATCCGGCATgaataaagcgcactcaacaatctgaaacccgccg > 1:4926182‑M1/1‑12 (MQ=255) cgcATCCGGCATTGACTGCAAACTTAACGCTGCTc < 1:817331/35‑1 (MQ=255) cgcATCCGGCATTGACTGCAAACTTAACGCTGCTc < 1:3010468/35‑1 (MQ=255) gcATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGtt < 1:2213862/42‑1 (MQ=255) cATCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggtttattacgtacatcaggtaa < 1:3285977‑M1/71‑62 (MQ=255) cATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGttt > 1:4549506/1‑42 (MQ=255) cATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGttt > 1:4521341/1‑42 (MQ=255) cATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTaa > 1:5110935/1‑44 (MQ=255) aTCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggtttattacgtacatcaggtaaa < 1:5294469‑M1/71‑63 (MQ=255) aTCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATc < 1:2610920/71‑1 (MQ=255) aTCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATc < 1:3816302/71‑1 (MQ=255) tCCGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggtttat < 1:4613403‑M1/53‑46 (MQ=255) tCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTa < 1:558612/41‑1 (MQ=255) tCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTa < 1:4649883/41‑1 (MQ=255) tCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGc < 1:2492126/54‑1 (MQ=255) cGGCATgaataaagcgcactcaacaatctgaaacccgccggaacggtttattacgtacatcaggtaaaact > 1:551660‑M1/1‑6 (MQ=255) cGGCATgaataaagcgcactcaacaatctgaaacccgcc > 1:2784640‑M1/1‑6 (MQ=255) cGGCATgaataaagcgcactcaacaatctgaaacccgcc > 1:4360212‑M1/1‑6 (MQ=255) cGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTa < 1:4328278/39‑1 (MQ=255) cGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTa < 1:200788/39‑1 (MQ=255) cGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGcc > 1:2034469/1‑53 (MQ=255) cGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCtt > 1:571193/1‑70 (MQ=255) cGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCtt > 1:2997924/1‑70 (MQ=255) gCATgaataaagcgcactcaacaatctgaaacccgccggaacggtttattacgtacatcaggtaaaactga > 1:2572827‑M1/1‑4 (MQ=255) gCATgaataaagcgcactcaacaatctgaaacccgccggaacggtttattacgtacatcaggtaaaactga > 1:4835968‑M1/1‑4 (MQ=255) | TTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCAT > Exported/5602‑5738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |