| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 453576 | 38 (0.620) | 13 (0.310) +GCGCATCAGGCATCG |
3/68 | NT | 33.2% | intergenic (+123/+27) | phr/ybgH | deoxyribodipyrimidine photolyase, FAD‑binding/predicted transporter |
| ? | Exported | = 2207536 | NA (NA) | intergenic (‑226/+204) | tldD/yhdP | predicted peptidase/conserved membrane protein, predicted transporter | |||||
TACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCG > Exported/453513‑453643 | tACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCAt > 1:3518111/1‑70 (MQ=255) cAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATc < 1:3902978/69‑1 (MQ=255) cAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTg < 1:469339/70‑1 (MQ=255) cAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTg < 1:1882276/70‑1 (MQ=255) cAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGc > 1:3704886/1‑71 (MQ=255) ttCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCgg > 1:3490295/1‑64 (MQ=255) tCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCa > 1:108133/1‑55 (MQ=255) tCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCa > 1:2564631/1‑55 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGc < 1:1872565/47‑1 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGc < 1:1023345/47‑1 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCAt < 1:5446975/49‑1 (MQ=255) tAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTAtt < 1:1772202/71‑1 (MQ=255) aaaTTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCg > 1:5413041/1‑57 (MQ=255) aaTTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGc > 1:1411317/1‑45 (MQ=255) aTTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGc < 1:1704320/44‑1 (MQ=255) aTTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTaa < 1:1819958/70‑1 (MQ=255) ttGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTaaa > 1:4168872/1‑69 (MQ=255) ttGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTaa > 1:3083005/1‑69 (MQ=255) tGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATc > 1:3792552/1‑45 (MQ=255) tGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATc > 1:1146138/1‑45 (MQ=255) cAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTc < 1:4068127/71‑1 (MQ=255) aGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTcc < 1:3233539/71‑1 (MQ=255) aaaTACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTccagc > 1:4814873/1‑71 (MQ=255) ccccgtaGGCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgctatgcgtctt < 1:5162831‑M1/68‑43 (MQ=255) ccccgtaGGCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgctatgcgtct > 1:5376657‑M1/4‑29 (MQ=255) ccccgtaGGCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgctatgcgtct > 1:354102‑M1/4‑29 (MQ=255) aTACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTccagcgc > 1:2764064/1‑71 (MQ=255) aTACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTccagcgc < 1:1415049/71‑1 (MQ=255) cccgtAGGCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgctatgcgtctta < 1:701243‑M1/69‑44 (MQ=255) cGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTccagcgccag < 1:4830765/71‑1 (MQ=255) cGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTccagcgcca < 1:297224/70‑1 (MQ=255) gTAGGCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatcc < 1:845347‑M1/71‑47 (MQ=255) gTAGGCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatcc < 1:3553236‑M1/71‑47 (MQ=255) gTAGGCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatcc < 1:3546526‑M1/71‑47 (MQ=255) gTAGGCCTGATAAGTCACGTC‑AGCGgcgcatcaggcatcggttgtc > 1:887445‑M1/1‑25 (MQ=255) tAGGCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatcc > 1:4465251‑M1/1‑24 (MQ=255) tAGGCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatcc > 1:4976579‑M1/1‑24 (MQ=255) gCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgc < 1:987004‑M1/53‑33 (MQ=255) gCCTGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgc < 1:553258‑M1/53‑33 (MQ=255) tGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgc < 1:3753859‑M1/50‑33 (MQ=255) tGATAAGTCGCGTC‑AGCGgcgcatcaggcatcggttgtcggatgcgacgc < 1:906803‑M1/50‑33 (MQ=255) tGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTaa < 1:2366748/49‑1 (MQ=255) tGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTaa < 1:3030704/49‑1 (MQ=255) gATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTcca < 1:2447993/55‑1 (MQ=255) gATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTcca < 1:1787791/55‑1 (MQ=255) aTAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGc < 1:3682591/36‑1 (MQ=255) aTAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGtt > 1:1308465/1‑70 (MQ=255) aTAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGtt < 1:3756168/70‑1 (MQ=255) aTAAGACGCGT‑AAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGtt < 1:835991/69‑1 (MQ=255) aaGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTccag > 1:5120385/1‑53 (MQ=255) aGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTg < 1:941609/71‑1 (MQ=255) gACGCGTCAAGCGTCGCATCAGGCATAGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGa < 1:5637452/71‑1 (MQ=255) gcgTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAAtt < 1:1500171/71‑1 (MQ=255) gTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAgcgcg < 1:4447817/56‑1 (MQ=255) tCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTg < 1:1160827/64‑1 (MQ=255) tCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCa < 1:1189997/71‑1 (MQ=255) aGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAgcg < 1:2274523/71‑1 (MQ=255) | TACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCG > Exported/453513‑453643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |