| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 464858 = | 81 (1.320) | 13 (0.220) | 5/94 | NT | 15.5% | coding (715/717 nt) | sdhB | succinate dehydrogenase, FeS subunit |
| ? | Exported | = 1412084 | 64 (1.090) | coding (21/1761 nt) | yejH | predicted ATP‑dependet helicase | |||||
Only 100 of 109 total aligned reads displayed.
TGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAA > Exported/464789‑464923 | tGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTT‑CAACGTAATGCGTa > 1:5329658/1‑70 (MQ=255)aaagatccatggcatactattagcagaataatctacctacgcgagaccatgatttttacacttcgcccaTa < 1:3199470‑M1/2‑1 (MQ=255)aaagatccatggcatactattagcagaataatctacctacgcgagaccatgatttttacacttcgcccaTa < 1:1376485‑M1/2‑1 (MQ=255)aaagatccatggcatactattagcagaataatctacctacgcgagaccatgatttttacacttcgcccaTa < 1:1932466‑M1/2‑1 (MQ=255) gAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCg < 1:1384463/71‑1 (MQ=255) gAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCg < 1:5672455/71‑1 (MQ=255) gAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCg < 1:5637462/71‑1 (MQ=255) ggggCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAg > 1:3640177/1‑71 (MQ=255) ggggCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAg > 1:4825530/1‑71 (MQ=255) gCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGcc > 1:3589317/1‑71 (MQ=255) tactattagcagaataatctacctacgcgagaccatgatttttacacttcgcccat > 1:90613‑M1/56‑56 (MQ=255) gAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGa > 1:4768378/1‑71 (MQ=255) aaCCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGAt < 1:3191153/71‑1 (MQ=255) aCCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATa < 1:3355990/71‑1 (MQ=255) aCCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATa < 1:4831998/71‑1 (MQ=255) cccGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATaa < 1:2039437/71‑1 (MQ=255) ccGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAg < 1:5369640/71‑1 (MQ=255) ccGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAg < 1:3525383/71‑1 (MQ=255) ccGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAg < 1:3900053/71‑1 (MQ=255) ttagcagaataatctacctacgcgagaccatgatttttacacttcgcccat > 1:4198719‑M1/51‑51 (MQ=255) cGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGa < 1:1624363/71‑1 (MQ=255) cGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGa < 1:841583/71‑1 (MQ=255) cGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGa < 1:4394929/71‑1 (MQ=255) gACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGAc < 1:1859948/71‑1 (MQ=255) cgcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATaa < 1:1446947/64‑1 (MQ=255) gcgcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCa < 1:5465554/71‑1 (MQ=255) gcCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑g > 1:624876/1‑71 (MQ=255) aTCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGt > 1:35157/1‑71 (MQ=255) aTCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGt > 1:1090347/1‑71 (MQ=255) tCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTaaa < 1:1537864/42‑1 (MQ=255) tCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTaaa < 1:664516/42‑1 (MQ=255) tCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCg < 1:3586082/45‑1 (MQ=255) tCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCg < 1:3549475/45‑1 (MQ=255) tCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAg < 1:5460763/58‑1 (MQ=255) cGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGAc > 1:3023154/1‑59 (MQ=255) ggCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAg > 1:2169389/1‑46 (MQ=255) ggCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAg > 1:2809108/1‑46 (MQ=255) ggCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCg > 1:4829995/1‑70 (MQ=255) ggCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGc < 1:1246320/71‑1 (MQ=255) atatCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCa < 1:3049843/71‑1 (MQ=255) tatCAAGTCGATGTTGTTGCAACGTAATGTGTAAACCg < 1:455036/38‑1 (MQ=255) tatCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAg > 1:5031890/1‑71 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCg < 1:4176417/36‑1 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCg < 1:281579/36‑1 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCg < 1:785371/36‑1 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTa > 1:4808866/1‑38 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTa > 1:1696049/1‑38 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAg > 1:2796779/1‑39 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGa > 1:4932630/1‑45 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGa > 1:2660538/1‑45 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGa > 1:3183117/1‑45 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGa > 1:2553014/1‑45 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCa‑a > 1:324804/1‑57 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCa‑a > 1:1826767/1‑57 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑g > 1:440743/1‑58 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑g > 1:3356972/1‑58 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑g > 1:367953/1‑58 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCAt > 1:4153199/1‑66 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGc < 1:5116807/71‑1 (MQ=255) tCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGc < 1:4598662/71‑1 (MQ=255) cAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGc > 1:2353200/1‑70 (MQ=255) aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGt > 1:4676966/1‑35 (MQ=255) aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGTa > 1:3230514/1‑36 (MQ=255) aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGTa > 1:2024096/1‑36 (MQ=255) aaGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAgg > 1:5112757/1‑38 (MQ=255) aGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAAc > 1:799971/1‑71 (MQ=255) gATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGa > 1:4173053/1‑43 (MQ=255) gATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAACCAg > 1:4378387/1‑70 (MQ=255) aTGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAAc > 1:1624072/1‑66 (MQ=255) aTGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAAc > 1:2290297/1‑66 (MQ=255) aTGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAAc > 1:5328296/1‑66 (MQ=255) tgttgtTGCAACGTAATGCGTAAACCGTAGGCCTg > 1:1018447/1‑35 (MQ=255) tgttgtTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAACCAGTGc > 1:5400891/1‑71 (MQ=255) ttgttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAACCAGTg < 1:1834866/68‑1 (MQ=255) gttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCg > 1:777925/1‑50 (MQ=255) gttgCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCg > 1:1339669/1‑50 (MQ=255) tacacttcgcccaTAAACCGTAGGCCTGATAAGACGCGCa < 1:192668‑M1/27‑1 (MQ=255) tacacttcgcccaTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTc > 1:5000250‑M1/14‑47 (MQ=255) tacacttcgcccaTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTc > 1:1920950‑M1/14‑47 (MQ=255) tacacttcgcccaTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTc > 1:373375‑M1/14‑47 (MQ=255) tacacttcgcccaTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTc > 1:4022236‑M1/14‑47 (MQ=255) gCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGc > 1:1913771/1‑48 (MQ=255) gCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGc > 1:3950061/1‑48 (MQ=255) gCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGc > 1:2531986/1‑48 (MQ=255) gCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGc > 1:1694434/1‑48 (MQ=255) cacttcgcccgTAAGCCGTAGGCCTGATAAGACGCGCA‑AAGCGTCGCAt < 1:3447958‑M1/38‑1 (MQ=255) cacttcgcccaTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTCGc < 1:5248528‑M1/36‑1 (MQ=255) cacttcgcccaTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTCGc < 1:5409598‑M1/36‑1 (MQ=255) cacttcgcccaTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTCGc < 1:2213374‑M1/36‑1 (MQ=255) cacttcgcccaTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTCGCAt < 1:4947273‑M1/38‑1 (MQ=255) cttcgcccaTAAACCGTAGGACTGATAAGACGCGCATA‑GCGTCGCATCAGGCa > 1:2507995‑M1/10‑53 (MQ=255) cGTAATGCGTAAACCGTAGTCCTGATAAGACgcgc < 1:3192435/35‑1 (MQ=255) cGTAATGCGTAAACCGTAGGCCTGATAAGACgcgc < 1:5600548/35‑1 (MQ=255) tcgcccaTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTCGCAt < 1:309600‑M1/38‑1 (MQ=255) tAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTg < 1:3085767/71‑1 (MQ=255) cgcccgTAAGCCGTAGGCCTGATAAGACGCGCA‑AAGCGTCGCAt < 1:276795‑M1/38‑1 (MQ=255) aTGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGaa > 1:4074436/1‑71 (MQ=255) aTGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGaa < 1:2752619/71‑1 (MQ=255) aTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTCGc > 1:3048109‑M1/2‑37 (MQ=255) aTAAACCGTAGGCCTGATAAGACGCGCATA‑GCGTCGc > 1:951124‑M1/2‑37 (MQ=255) | TGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAAACCGTAGGCCTGATAAGACGCGCA‑A‑GCGTCGCATCAGGCAACCAGTGCCGGATGCGGCGTGAA > Exported/464789‑464923 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |