| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1159168 = | 73 (1.190) | 7 (0.140) +CGATCAGTT |
3/80 | NT | 16.4% | coding (506/1221 nt) | astC | succinylornithine transaminase, PLP‑dependent |
| ? | Exported | = 1751026 | 15 (0.240) | coding (189/1038 nt) | yfiF | predicted methyltransferase | |||||
GATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGCTGCCCACCCGC > Exported/1159098‑1159232 | gATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCCGCGCGCTGGCAGAGTTAATATCGTTATATg > 1:2473084/1‑71 (MQ=255) tGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATgca < 1:628112/71‑1 (MQ=255) cGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATg < 1:3913796/70‑1 (MQ=255) gACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGAc < 1:599053/71‑1 (MQ=255) aCAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACg < 1:4014221/71‑1 (MQ=255) aTCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATgcagca < 1:3468021/63‑1 (MQ=255) aTCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATgcagca < 1:4455619/63‑1 (MQ=255) tCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATgcagca < 1:5621227/62‑1 (MQ=255) aCCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGaa > 1:3935789/1‑67 (MQ=255) aCCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATc > 1:3914364/1‑71 (MQ=255) aCCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATc > 1:5175907/1‑71 (MQ=255) ccGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAata < 1:1792393/68‑1 (MQ=255) ccGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAata < 1:216124/68‑1 (MQ=255) ccGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAata < 1:2086887/68‑1 (MQ=255) cGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATcc < 1:373697/70‑1 (MQ=255) cacaGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATccgcc < 1:5407661/71‑1 (MQ=255) caGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATgca > 1:1197775/1‑51 (MQ=255) ggTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCa < 1:1031793/71‑1 (MQ=255) gTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAg < 1:434273/71‑1 (MQ=255) gTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAg < 1:926157/71‑1 (MQ=255) gTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAg < 1:2910010/71‑1 (MQ=255) tAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGt > 1:3218186/1‑71 (MQ=255) gagTCGTCAATCAGCGCGCTGGCATAGTTAATATCGTTATATg < 1:3395604/43‑1 (MQ=255) gtcAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAata < 1:2114453/52‑1 (MQ=255) tcAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATg < 1:4896349/44‑1 (MQ=255) tcAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATg < 1:4942811/44‑1 (MQ=255) tcAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCaaa < 1:5042264/71‑1 (MQ=255) aTCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCAt < 1:3975537/40‑1 (MQ=255) aTCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCAt < 1:1655175/40‑1 (MQ=255) aTCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCAt < 1:3272570/40‑1 (MQ=255) aTCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGaa > 1:852734/1‑46 (MQ=255) aTCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATc < 1:4900098/71‑1 (MQ=255) aTCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATc < 1:1297197/71‑1 (MQ=255) aTCAGCGCGCTGGCAGAGTTAATATCGTTATATCCAGCAt < 1:3238/40‑1 (MQ=255) tCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATcc < 1:3036759/71‑1 (MQ=255) tCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATcc < 1:3483613/71‑1 (MQ=255) tCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATcc < 1:1438248/71‑1 (MQ=255) cgcgcTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGGAAAATCCtgtg < 1:1055655/71‑1 (MQ=255) cgcgcTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCtgtg < 1:4600407/71‑1 (MQ=255) cgcgcTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCtgtg < 1:860688/71‑1 (MQ=255) acagcgaatcttcccacaactgatcgGCAGCATGACgaatatgt > 1:1001604‑M1/27‑42 (MQ=255) gcTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAAt < 1:243616/71‑1 (MQ=255) tGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCtg < 1:5457113/64‑1 (MQ=255) tGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAg > 1:2730235/1‑71 (MQ=255) gcgaatcttcccacaactgatcgGCAGCATGACGaa > 1:4879847‑M1/24‑36 (MQ=255) gcgaatcttcccacaactgatcgGCAGCATGACGAat < 1:3651272‑M1/14‑1 (MQ=255) gcgaatcttcccacaactgatcgGCAGCATGACGAat < 1:5295598‑M1/14‑1 (MQ=255) gcgaatcttcccacaactgatcgGCAGCATGACGAat < 1:5504604‑M1/14‑1 (MQ=255) gcgaatcttcccacaactgatcgGCAGCATGACGAat < 1:3465543‑M1/14‑1 (MQ=255) gaatcttcccacaactgatcgGCAGCATGACGAata < 1:1839226‑M1/15‑1 (MQ=255) gCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAggc < 1:4694969/71‑1 (MQ=255) cAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAggct < 1:955852/71‑1 (MQ=255) agTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGgc > 1:553154/1‑47 (MQ=255) agTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAggctggc > 1:3758773/1‑71 (MQ=255) agTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAggctggc > 1:5419899/1‑71 (MQ=255) ttAATATCGTTATATGCAGCATGACGAATATCCGCCgg < 1:5362670/38‑1 (MQ=255) ttAATATCGTTATATGCAGCATGACGAATATCCGCCgg < 1:177624/38‑1 (MQ=255) ttAATATCGTTATATGCAGCATGACGAATATCCGCCgg < 1:5091972/38‑1 (MQ=255) ttAATATCGTTATATGCAGCATGACGAATATCCGCCgg < 1:89230/38‑1 (MQ=255) ttAATATCGTTATATGCAGCATGACGAATATCCGCCgg < 1:2218815/38‑1 (MQ=255) ttAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTg < 1:5390443/43‑1 (MQ=255) ttAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTg < 1:506825/43‑1 (MQ=255) ttAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTg < 1:870635/43‑1 (MQ=255) ttAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTg < 1:1918065/43‑1 (MQ=255) aaTATCGTTATATGCAGCATGACGAATATccgccg > 1:4628277/1‑35 (MQ=255) aaTATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGgc > 1:1576266/1‑43 (MQ=255) aaTATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGgc > 1:4495089/1‑43 (MQ=255) aaTATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGCTGcc > 1:155580/1‑71 (MQ=255) aaTATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGCTGc < 1:3588627/70‑1 (MQ=255) aaTATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGCTGc < 1:2760063/70‑1 (MQ=255) aaTATAGTTATATGCAGCATGACGAATATccgccg > 1:5532655/1‑35 (MQ=255) tatCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCt > 1:5265866/1‑51 (MQ=255) tatCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCt > 1:1778863/1‑51 (MQ=255) tatCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCt > 1:3191490/1‑51 (MQ=255) tatCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGa < 1:2168393/55‑1 (MQ=255) tatCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGa < 1:5518327/55‑1 (MQ=255) tatCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGa < 1:4429725/55‑1 (MQ=255) tCGTTATATGCAGCATGACGAATATCCGCCGGCAg > 1:1541159/1‑35 (MQ=255) tCGTTATATGCAGCATGACGAATATCCGCCGGCAg > 1:576825/1‑35 (MQ=255) tCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGaa > 1:1735771/1‑54 (MQ=255) tCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGa > 1:1675323/1‑53 (MQ=255) tCGTTAGATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGaa > 1:729324/1‑54 (MQ=255) cGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGCTGCCCAccc > 1:4003464/1‑71 (MQ=255) ttATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGCTGCCCACCCGc < 1:2249049/71‑1 (MQ=255) atatGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATa > 1:3967004/1‑51 (MQ=255) atatGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATa > 1:4399793/1‑51 (MQ=255) atatGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAggct < 1:1716465/55‑1 (MQ=255) atatGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAggct < 1:4471474/55‑1 (MQ=255) | GATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGCTGCCCACCCGC > Exported/1159098‑1159232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |