| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1942156 | 67 (1.090) | 5 (0.080) | 3/94 | NT | 6.7% | coding (261/660 nt) | yqfA | predicted oxidoreductase, inner membrane subunit |
| ? | Exported | = 1942182 | 76 (1.290) | coding (235/660 nt) | yqfA | predicted oxidoreductase, inner membrane subunit | |||||
Only 100 of 103 total aligned reads displayed.
ACGGAGAATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAA > Exported/1942086‑1942224 | aCGGAGAATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGG > 1:3412697‑M1/1‑71 (MQ=255) gagaATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAACAGCGCAATGGTc > 1:229396/1‑70 (MQ=255) gaATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCaaa > 1:2139554/1‑71 (MQ=255) gaATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCaaa > 1:5514116/1‑71 (MQ=255) gaATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCaaa > 1:1185457/1‑71 (MQ=255) gaATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCaaa > 1:4786920/1‑71 (MQ=255) aTCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAAtt < 1:2993721/71‑1 (MQ=255) cAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATttct < 1:3589791/71‑1 (MQ=255) gCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATttcttc < 1:457814/71‑1 (MQ=255) gCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATttcttc < 1:5525693/71‑1 (MQ=255) gCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATttct < 1:3930134/69‑1 (MQ=255) gCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATttct < 1:2730143/69‑1 (MQ=255) ccccACCAGCAAACACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATttcttc < 1:2012132/70‑1 (MQ=255) ccaGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCca > 1:5238898/1‑70 (MQ=255) caGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCcaca > 1:799034/1‑71 (MQ=255) gCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACAtt < 1:3117524/71‑1 (MQ=255) gCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACAtt < 1:639512/71‑1 (MQ=255) gCAAAAACGGCGTGTAGGGTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACAtt < 1:360158/71‑1 (MQ=255) cAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAAt < 1:5293859/55‑1 (MQ=255) aaaaaCGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCa < 1:1027880/51‑1 (MQ=255) aaaaaCGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCa < 1:3970714/51‑1 (MQ=255) aaaaaCGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACAttt < 1:474049/70‑1 (MQ=255) aaaaCGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATttcttc > 1:577466/1‑59 (MQ=255) aaaaCGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACAttt > 1:2879191/1‑69 (MQ=255) aCGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAAttt > 1:4133907/1‑52 (MQ=255) ggCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCg > 1:4390930/1‑71 (MQ=255) cGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATttct < 1:1863776/50‑1 (MQ=255) cGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGtt < 1:1730255/71‑1 (MQ=255) cGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGtt < 1:2700836/71‑1 (MQ=255) gtgtAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGtt < 1:3578555/70‑1 (MQ=255) tgtAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGtt < 1:3816296/69‑1 (MQ=255) tgtAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTtga < 1:227625/71‑1 (MQ=255) tAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTtgat > 1:3398283/1‑70 (MQ=255) gTTCCGGCAATCAACAGGTAAATAGCGCAATGGgcaaaaatgtggctgaagaaatttgacca < 1:3700184‑M1/62‑30 (MQ=255) gTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAg > 1:4268410/1‑47 (MQ=255) gTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAg > 1:4608313/1‑47 (MQ=255) gTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAgg < 1:603535/71‑1 (MQ=255) tCCGGCAATCAACAGGTAAATAGCGCAATGGgcaaaaatgtggctgaagaaatttgaccatt > 1:1153871‑M1/1‑31 (MQ=255) tCCGGCAATCAACAGGTAAATAGCGCAATGGgcaaaaatgtggctgaagaaatttgaccatt > 1:2002710‑M1/1‑31 (MQ=255) ccGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTg > 1:12276/1‑55 (MQ=255) cGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATg < 1:5604301/71‑1 (MQ=255) ggCAATCAACAGGTAAATAGCGCAATGGTCAAATttcttc > 1:2331584/1‑40 (MQ=255) ggCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGcc > 1:1484586/1‑44 (MQ=255) ggCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGcc > 1:5329281/1‑44 (MQ=255) ggCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATgt < 1:2059960/71‑2 (MQ=255) gCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCcc > 1:3800905‑M2/1‑53 (MQ=255) gCAATCAACAGGTAAATAGCGCAACGGgcaaaaatgtggctgaagaaatttgaccatt > 1:5637941‑M1/1‑27 (MQ=255) gCAATCAACAGGTAAATAGCGCAACGGgcaaaaatgtggctgaagaaatttgaccatt > 1:4043483‑M1/1‑27 (MQ=255) cAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACAtt > 1:1356297/1‑47 (MQ=255) cAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGtt > 1:870346/1‑57 (MQ=255) cAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCg > 1:5056642/1‑71 (MQ=255) cAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCg > 1:3920329/1‑71 (MQ=255) aaTCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGt < 1:3617279/71‑1 (MQ=255) aTCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGt > 1:2010831/1‑70 (MQ=255) cAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGa > 1:1241732/1‑70 (MQ=255) aaCAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAg < 1:3750639/58‑1 (MQ=255) aaCAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGa > 1:2620681/1‑69 (MQ=255) aaCAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGAt < 1:1279511/70‑1 (MQ=255) aaCAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATa < 1:937868/71‑1 (MQ=255) cAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCg > 1:610945/1‑64 (MQ=255) cAGGAAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGc > 1:842431/1‑63 (MQ=255) cgTATATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATg < 1:4270905/58‑1 (MQ=255) gTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAgg < 1:4578693/54‑1 (MQ=255) gTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAgg < 1:450839/54‑1 (MQ=255) gTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGt < 1:4925943/62‑1 (MQ=255) gTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCg > 1:426951/1‑71 (MQ=255) gTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCg > 1:2934765/1‑71 (MQ=255) gTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCg < 1:1418337/71‑1 (MQ=255) aaaTAGCGCAATGGTCAAATTTCTTCAGCCACAtttt > 1:3299799/1‑37 (MQ=255) aaaTAGCGCAATGGTCAAATTTCTTCAGCCACAtttt > 1:3102477/1‑37 (MQ=255) aaaTAGCGCAATGGTCAAATTTCTTCAGCCACAtt < 1:4545877/35‑1 (MQ=255) aaaTAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTtgatg > 1:968080/1‑49 (MQ=255) aaaTAGCGCAATGGTCAAATATCTTCAGCCACATTTTTGCCCGTTGATGAGGaa > 1:215892/1‑54 (MQ=255) aTAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAgg < 1:3809596/50‑1 (MQ=255) tAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATTGAGCGTCGaa < 1:1251641/71‑1 (MQ=255) tAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGt > 1:3063830/1‑67 (MQ=255) tAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGaa < 1:5660964/71‑1 (MQ=255) aGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCc < 1:4645323‑M2/37‑2 (MQ=255) cgcAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCg < 1:1202375/71‑1 (MQ=255) cAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAg < 1:1485740/71‑1 (MQ=255) cAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAg < 1:1513046/71‑1 (MQ=255) aaTGGTCAAATTTCTTCAGCCACATTTTTGCccgttgcgctatttacctgttgattgc > 1:4043483‑M2/1‑31 (MQ=255) aaTGGTCAAATTTCTTCAGCCACATTTTTGCccgttgcgctatttacctgttgattgc > 1:5637941‑M2/1‑31 (MQ=255) aaTGGTCAAATTTCTTCAGCCACATTTTTGCccattgcgctatttacctgttgattgccgga > 1:1153871‑M2/1‑31 (MQ=255) aaTGGTCAAATTTCTTCAGCCACATTTTTGCccattgcgctatttacctgttgattgccgga > 1:2002710‑M2/1‑31 (MQ=255) aaTGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGAt < 1:3849316/54‑1 (MQ=255) aaTGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAgg < 1:2003873/71‑1 (MQ=255) aaTGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGACGAGGAATGGCGTGATAGAGCGTCGAAGCGAgg < 1:4543044/71‑1 (MQ=255) aTGGTCAAATTTCTTCAGCCACATTTTTGCCCGtt < 1:32765/35‑1 (MQ=255) aTGGTCAAATTTCTTCAGCCACATTTTTGCCCGtt < 1:4246377/35‑1 (MQ=255) aTGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGt > 1:4825715/1‑60 (MQ=255) aTGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAgg < 1:5309126/70‑1 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCccattgcgctatttacctgttgattgccggaac < 1:3700184‑M2/62‑34 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCCCGTtg < 1:4164593/35‑1 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGaa > 1:2791733/1‑71 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGaa < 1:3790266/71‑1 (MQ=255) tGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGaa > 1:569084/1‑71 (MQ=255) gggcaaaaatgtggctgaagaaatttgaccattgcgctatttacctgttgattgc > 1:3800905‑M1/1‑2 (MQ=255) ggcaaaaatgtggctgaagaaatttgaccattgcgct < 1:4645323‑M1/37‑37 (MQ=255) gTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGa > 1:2261605/1‑60 (MQ=255) | ACGGAGAATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGGTCAAATTTCTTCAGCCACATTTTTGCCCGTTGATGAGGAATGGCGTGATAGAGCGTCGAAGCGAGGAA > Exported/1942086‑1942224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |