| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2207483 | 19 (0.310) | 14 (0.250) | 3/88 | NT | 25.2% | intergenic (‑173/+257) | tldD/yhdP | predicted peptidase/conserved membrane protein, predicted transporter |
| ? | Exported | = 2294082 | 66 (1.200) | intergenic (+109/‑166) | gldA/yijF | glycerol dehydrogenase, NAD/conserved hypothetical protein | |||||
CCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCG > Exported/2207413‑2207553 | ccTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC < 1:996427‑M1/71‑1 (MQ=255) tGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACgg > 1:2750674/1‑71 (MQ=34) aGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATg < 1:4678984/71‑1 (MQ=34) acaGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCg < 1:3784976/70‑1 (MQ=35) acaGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCg < 1:3297249/70‑1 (MQ=35) aGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGttt > 1:5016312/1‑71 (MQ=34) cGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGt < 1:3217973/71‑1 (MQ=34) gTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTg > 1:1425223/1‑69 (MQ=35) gTCGCATCAGGCAACGGCTGTCGGAAGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTg > 1:3188908/1‑69 (MQ=25) gCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTa > 1:5511348/1‑68 (MQ=35) gCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTa > 1:2725929/1‑68 (MQ=35) gCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTa > 1:2912863/1‑68 (MQ=35) aGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGtt > 1:4296870/1‑59 (MQ=35) aGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGtt > 1:483654/1‑59 (MQ=35) aCGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATg < 1:3875958/47‑1 (MQ=38) cGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACg < 1:2768681/71‑1 (MQ=34) ggCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACg > 1:4908389/1‑70 (MQ=35) ggCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGc < 1:4134863/71‑1 (MQ=34) ggCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGc < 1:1050430/71‑1 (MQ=34) cTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTA‑GTGCGTTTTGTAGGCCTGATAAGACGcggc < 1:1257506/71‑4 (MQ=11) atgTCGGATGCGGCGTAAACGCCTTATCCGACCTACaaaatcacgc < 1:4143606‑M1/45‑11 (MQ=255) tGTCGGATGCGGCGTAAACGCCTTATCCGACCTACaaaatcacgc < 1:4111864‑M1/45‑11 (MQ=255) gTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGGTA‑GTGCGTTTTGTAGTCCTGATAAGACGcggc > 1:5003812/1‑66 (MQ=2) tGCGGCGTAAACGCCTTATCCGACCTACaaaatcacgctaaatc > 1:4543715‑M1/1‑28 (MQ=255) tGCGGCATAAACGCCTTATCCGACCTACaaaatcacgctaaa < 1:1970746‑M1/42‑15 (MQ=255) tGCGGCATAAACGCCTTATCCGACCTACaaaatcacgctaaa < 1:1964225‑M1/42‑15 (MQ=255) gcggcaTAAACGCCTTATCCGACCTACaaaatcacgctaaatc > 1:2903355‑M1/1‑27 (MQ=255) gcggcaTAAACGCCTTATCCGACCTACaaaatcacgctaaatc > 1:3013745‑M1/1‑27 (MQ=255) cggcaTAAACGCCTTATCCGACCTACaaaatcacgctaaa < 1:2549137‑M1/40‑15 (MQ=255) ggcaTAAACGCCTTATCCGACCTACaaaatcacgctaaa > 1:3192519‑M1/1‑25 (MQ=255) ggcaTAAACGCCTTATCCGACCTACaaaatcacgctaaa > 1:3576888‑M1/1‑25 (MQ=255) tAAACGCCTTATCCGACCTACaaaatcacgctaaatca > 1:99864‑M1/1‑21 (MQ=255) tAAACGCCTTATCCGACCTACaaaatcacgctaaatca > 1:3233117‑M1/1‑21 (MQ=255) aaCGCCTTATCCGACCTACaaaatcacgctaaatcag > 1:688064‑M1/1‑19 (MQ=255) aaCGCCTTATCCGACCTACaaaatcacgctaaatca > 1:721931‑M1/1‑19 (MQ=255) ccTACaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtagcgcatca > 1:223170‑M1/1‑5 (MQ=255) ccTACaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtagcgcatca > 1:1562397‑M1/1‑5 (MQ=255) tACaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtagcgcatcaggcatt > 1:2619056‑M1/1‑3 (MQ=255) tACaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtagcgc < 1:4240040‑M1/60‑58 (MQ=255) tACaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtagcgc < 1:900149‑M1/60‑58 (MQ=255) tACaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtagcgc < 1:2471523‑M1/60‑58 (MQ=255) tACaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtagcgc < 1:5430285‑M1/60‑58 (MQ=255) tACaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtag < 1:1753831‑M1/57‑55 (MQ=255) tACaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtag < 1:1730447‑M1/57‑55 (MQ=255) tACaaaagcacgcaaattcaatatattgcagagatggcgta > 1:5455641‑M1/1‑3 (MQ=255) aCaaaagcacgcaaattcaatatattgcagagattgcgtaggcctgataagcgtagcgca < 1:3144606‑M1/60‑59 (MQ=255) aCaaaagcacgcaaattcaatatattgcagagattgcgtaggcctgataagcgtagcgca < 1:5008087‑M1/60‑59 (MQ=255) aCaaaagcacgcaaattcaatatattgcagagattgcgtaggcctgataagcgtagcgca < 1:2117498‑M1/60‑59 (MQ=255) aCaaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgt < 1:465315‑M1/54‑53 (MQ=255) caaaagcacgcaaattcaatatattgcagagattgcgtaggcctgataagcgtagcgcatcaggcaatttt > 1:5264793‑M1/1‑1 (MQ=255) caaaagcacgcaaattcaatatattgcagagattgcgtaggcctgataagcgtagcgcat > 1:197334‑M1/1‑1 (MQ=255) caaaagcacgcaaattcaatatattgcagagattgcgtaggcctgataagcgtagcgcat > 1:4445909‑M1/1‑1 (MQ=255) caaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtagcgcatcaggcattttt < 1:5487399‑M1/71‑71 (MQ=255) caaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtagcgcatcaggcattttt < 1:1393426‑M1/71‑71 (MQ=255) caaaagcacgcaaattcaatatattgcagagatggcgtaggcctgataagcgtagcgcatcaggcatttt < 1:44739‑M1/70‑70 (MQ=255) caaaagcacgcaaattcaatatattgcagagatggcgtaggcctga > 1:4811485‑M1/1‑1 (MQ=255) caaaagcacgcaaattcaatatattgcagagatggcgtaggcctga > 1:1119658‑M1/1‑1 (MQ=255) caaaagcacgcaaaatcaatatattgcagagatggcgtaggcctgataagcgtagcgcatcaggcattttt > 1:5198063‑M1/1‑1 (MQ=255) | CCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCG > Exported/2207413‑2207553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |