| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 395230 | 79 (1.290) | 11 (0.220) +TCGACGTAC |
5/80 | NT | 12.8% | coding (581/1566 nt) | ahpF | alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding |
| ? | Exported | 2815669 = | 106 (1.730) | coding (1325/1587 nt) | yjcC | predicted signal transduction protein | |||||
Only 100 of 137 total aligned reads displayed.
GCAATTGATGATTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGAACACAT > Exported/2815602‑2815738 | gCAATTGATGATTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGa < 1:386969/70‑1 (MQ=255) cAATTGATGATTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGaaa < 1:2090785/71‑1 (MQ=255) ttGATGATTTTGGTATTGGCTACTCTGACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGaaaa < 1:1863200/69‑1 (MQ=255) gatgatTTTGGTATTGGCTACTCTAACTTGCATACCCTTAAATCATTGAATGTCGATATTTTGAAAATCGa > 1:4711883/1‑71 (MQ=255) gatgatTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATc > 1:4079980/1‑69 (MQ=255) gatgatTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCg < 1:136721/70‑1 (MQ=255) gatgatTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGa > 1:5555483/1‑71 (MQ=255) gatgatTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGa > 1:2399450/1‑71 (MQ=255) gatgatTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGa > 1:2668360/1‑71 (MQ=255) tgatTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTg < 1:4268570/61‑1 (MQ=255) tgatTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGAc > 1:2348010/1‑70 (MQ=255) atTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACaa < 1:3409689/70‑1 (MQ=255) tttGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATc > 1:2884122/1‑71 (MQ=255) tGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGa > 1:3155563/1‑63 (MQ=255) gTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGtt < 1:3759331/70‑1 (MQ=255) tATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACaa < 1:1799497/63‑1 (MQ=255) tATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttg < 1:2781343/71‑1 (MQ=255) tATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttg < 1:2320603/71‑1 (MQ=255) tATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttg < 1:2032062/71‑1 (MQ=255) ttGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGAc < 1:1026391/59‑1 (MQ=255) ttGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGAc < 1:2092457/59‑1 (MQ=255) ttGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgtt > 1:4072580/1‑71 (MQ=255) ttGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgtt > 1:1088338/1‑71 (MQ=255) attgCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACaa < 1:4031692/58‑1 (MQ=255) cTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGa < 1:1529827/69‑1 (MQ=255) ctctAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGaaaa < 1:3597795/47‑1 (MQ=255) tctAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCg < 1:4116241/49‑1 (MQ=255) tctAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGtt < 1:5502758/59‑1 (MQ=255) tctAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGtt < 1:2245627/59‑1 (MQ=255) tctAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGt < 1:479358/58‑1 (MQ=255) ctAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAAt > 1:1530991/1‑46 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGaaa > 1:3185887/1‑43 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGaaa > 1:220579/1‑43 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACaaa > 1:1919895/1‑52 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGttt > 1:1420465/1‑58 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgtt > 1:592447/1‑61 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgtt > 1:460033/1‑61 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGaaa > 1:4222603/1‑65 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGaaa > 1:4557479/1‑65 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGa > 1:3938950/1‑71 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGa > 1:4399615/1‑71 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGa > 1:912302/1‑71 (MQ=255) tAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGa > 1:1709405/1‑71 (MQ=255) aaCTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGac > 1:463367/1‑71 (MQ=255) aCTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCg > 1:3919678/1‑45 (MQ=255) aCTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGa > 1:2199763/1‑46 (MQ=255) aCTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGac > 1:483272/1‑70 (MQ=255) aCTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTCTTGAAACGCTGac < 1:850357/70‑1 (MQ=255) ttGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGaaa > 1:561390/1‑61 (MQ=255) gCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGaccacc > 1:854133/1‑70 (MQ=255) gCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGaccacc > 1:2993040/1‑70 (MQ=255) gCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGaccacc > 1:3727663/1‑70 (MQ=255) cATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGt < 1:3265703/49‑1 (MQ=255) cATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGt < 1:2548269/49‑1 (MQ=255) aTAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgttg < 1:5418769/54‑1 (MQ=255) aTAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgttg < 1:3578873/54‑1 (MQ=255) aTAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgttg < 1:4874957/54‑1 (MQ=255) aTAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgttg < 1:5201628/54‑1 (MQ=255) aTAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGAccacccac < 1:498839/71‑1 (MQ=255) tAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgttg > 1:4663855/1‑53 (MQ=255) tAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGAccacccac > 1:3312843/1‑70 (MQ=255) aCCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACaa < 1:5551581/70‑1 (MQ=255) aCCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACaa > 1:4632000/1‑70 (MQ=255) aCCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACaa < 1:2115828/70‑1 (MQ=255) tatgaaatcgttgccaatcgacgtacTGAAAATCGACAAAATGTTTGTTGa > 1:4187642‑M2/27‑51 (MQ=255) ccTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGa > 1:2026041/1‑59 (MQ=255) ccTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACaaaa > 1:4903493/1‑71 (MQ=255) tgaaatcgttgccaatcgacgtacTGAAAATCGACAAAATGTTTGTTGa > 1:4385557‑M2/25‑49 (MQ=255) tgaaatcgttgccaatcgacgtacTGAAAATCGACAAAATGTTTGTTGa > 1:5254391‑M2/25‑49 (MQ=255) tgaaatcgttgccaatcgacgtacTGAAAATCGACAAAATGTTTGTTGa > 1:3959195‑M2/25‑49 (MQ=255) tAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgtt < 1:300218/46‑1 (MQ=255) tAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTttgtt < 1:2192643/46‑1 (MQ=255) gaaatcgttgccaatcgacgtacTGAAAATCGACAAAATGTttg > 1:2922799‑M2/24‑44 (MQ=255) aaatcgttgccaatcgacgtacTGAAAATCGACAAAATGTTTGTTgaag < 1:2269489‑M2/27‑2 (MQ=255) aaaTCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGaaa > 1:1743018/1‑49 (MQ=255) aTTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGacca > 1:3370698/1‑53 (MQ=255) aTTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCAtt > 1:1173682/1‑71 (MQ=255) aTTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCAtt < 1:4760136/71‑1 (MQ=255) tGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCAttt > 1:4608613/1‑70 (MQ=255) gAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTg < 1:5608972/70‑1 (MQ=255) gAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTg < 1:4652426/70‑1 (MQ=255) gAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTg < 1:694757/70‑1 (MQ=255) gAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGa > 1:1188923/1‑71 (MQ=255) caatcgacgtacTGAAAATCGACAAAATGTTTGTTGaa < 1:1671011‑M2/26‑1 (MQ=255) tGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACaaaa > 1:868876/1‑56 (MQ=255) tGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACaaaa > 1:2593308/1‑56 (MQ=255) gTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCAttt < 1:5069700/65‑1 (MQ=255) tCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGc < 1:5340932/70‑1 (MQ=255) cGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCg > 1:1347737/1‑70 (MQ=255) atatTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACaa < 1:1327556/49‑1 (MQ=255) tatTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGaa > 1:923611/1‑70 (MQ=255) tttGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTg < 1:5682666/58‑1 (MQ=255) tttGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGAAcaca > 1:1503457/1‑71 (MQ=255) tttGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGAAcaca > 1:392349/1‑71 (MQ=255) ttGAAAATCGACAAATCGTTTGTTGAAACGCTGAccaccc > 1:4885020/1‑40 (MQ=255) ttGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGaa > 1:4962514/1‑66 (MQ=255) ttGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGAACAcat > 1:1005062/1‑71 (MQ=255) ttGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGAACAcat > 1:1166616/1‑71 (MQ=255) ttGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGAACAcat > 1:1093128/1‑71 (MQ=255) ttGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCAACAAAACCAGTCATTTGa > 1:4773964/1‑58 (MQ=255) | GCAATTGATGATTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGAACACAT > Exported/2815602‑2815738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |