| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | Exported | 1,315,169 | C→T | 13.7% | N119N (AAC→AAT) | hisH → | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 1,315,169 | 0 | C | T | 13.7% | 248.6 / 24.1 | 95 | N119N (AAC→AAT) | hisH | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
| Reads supporting (aligned to +/- strand): ref base C (30/52); new base T (9/4); total (39/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.49e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
TCATCGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGTACTTTTACTTTGTT > Exported/1315105‑1315238 | tcatcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGtt < 1:4752277/71‑1 (MQ=255)tcatcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGtt < 1:4310173/71‑1 (MQ=255)tcatcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGtt < 1:83795/71‑1 (MQ=255) atcGACGAAGACGTGCCTAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAAc > 1:2545492/1‑63 (MQ=255) atcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGTCTGGAACCGCGTTTa < 1:1810975/71‑1 (MQ=255) atcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAAc > 1:639588/1‑63 (MQ=255) atcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAAc > 1:4351005/1‑63 (MQ=255) atcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAAc > 1:3784371/1‑63 (MQ=255) atcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAAc > 1:550877/1‑63 (MQ=255) atcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAAc > 1:2846985/1‑63 (MQ=255) atcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTa > 1:2421281/1‑71 (MQ=255) tcGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTa < 1:4890226/70‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:4368910/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:2647895/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:3014732/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:3208163/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:22745/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:3679392/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:1209455/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:1311715/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:1753560/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:4315100/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:2105639/67‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTAcc < 1:2529052/70‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTAcc < 1:1999586/70‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTAcc < 1:1471351/70‑1 (MQ=255) gacgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTAcc < 1:4677364/70‑1 (MQ=255) acgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGTCTGGAACCGCGttt < 1:5081148/66‑1 (MQ=255) cgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCgc < 1:4766079/71‑1 (MQ=255) cgaAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCgc < 1:2314837/71‑1 (MQ=255) gACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACcg > 1:2665993/1‑56 (MQ=255) gACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACcg > 1:4422947/1‑56 (MQ=255) gACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACcg > 1:292933/1‑56 (MQ=255) aCGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:293674/60‑1 (MQ=255) aCGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCgcaggc < 1:2545698/70‑1 (MQ=255) cGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAATCGCGTTTACCCgcaggcag < 1:4745165/71‑1 (MQ=255) cGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAATCGCGTTTACCCgcaggcag < 1:4155839/71‑1 (MQ=255) gCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAATCGCGTTTACCCgcaggcag < 1:874309/68‑1 (MQ=255) ccGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAggcaggca < 1:2952412/70‑1 (MQ=255) ccGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAggcaggca < 1:2876314/70‑1 (MQ=255) ccGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAggcaggca < 1:4938544/70‑1 (MQ=255) ccGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCaa > 1:1025503/1‑71 (MQ=255) gAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGtt < 1:1888555/52‑1 (MQ=255) gAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAAcc < 1:4765230/71‑1 (MQ=255) aaaaTGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCgcaggc < 1:4757243/62‑1 (MQ=255) aaaaTGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCgcaggc < 1:3123299/62‑1 (MQ=255) aaaaTGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCgcaggc < 1:3588682/62‑1 (MQ=255) aaaaTGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCgcaggc < 1:4169629/62‑1 (MQ=255) aaaaTGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCgcaggc < 1:2000320/62‑1 (MQ=255) aaaTGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCg > 1:2695440/1‑70 (MQ=255) aaaTGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGc > 1:2469085/1‑71 (MQ=255) aaaTGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGc > 1:1172948/1‑71 (MQ=255) aaTGACCGACTTTGGTCTGCCACTGCCACATATGGGCTTGAACCGCGTTTACCCGCAGGCAGGCAACCGcc > 1:377405/1‑71 (MQ=255) aaTGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGcc > 1:4210825/1‑71 (MQ=255) gACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGttt < 1:4130225/47‑1 (MQ=255) gACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGtt > 1:3317043/1‑46 (MQ=255) gACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGtt > 1:2053499/1‑46 (MQ=255) gACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGtt > 1:2101097/1‑46 (MQ=255) gACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGtt > 1:4186785/1‑46 (MQ=255) gACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGtt > 1:4187181/1‑46 (MQ=255) ccGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGttt > 1:951530/1‑71 (MQ=255) gACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGTAACCGCCTGttt > 1:1022955/1‑69 (MQ=255) gACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGttt > 1:4846273/1‑69 (MQ=255) gACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGttt > 1:717828/1‑69 (MQ=255) gACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGttt > 1:647288/1‑69 (MQ=255) gACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGttt > 1:635568/1‑69 (MQ=255) gACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGttt > 1:5149977/1‑69 (MQ=255) gACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGttt > 1:4038577/1‑69 (MQ=255) tGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAgggg < 1:120037/70‑1 (MQ=255) tgccactgccacATATGGGCTGGAACCTCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAggg < 1:3025932/64‑1 (MQ=255) tgccactgccacATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAggg < 1:2640204/64‑1 (MQ=255) tgccactgccacATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAggg < 1:2840830/64‑1 (MQ=255) tgccactgccacATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTg > 1:3215201/1‑69 (MQ=255) tcccactgccacATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAggg < 1:3750632/62‑1 (MQ=255) ccactgccacATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGaa < 1:4021217/69‑1 (MQ=255) ccactgccacATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGaa < 1:439395/69‑1 (MQ=255) gccacATATGGGCTGGAATCGCGTTTACCCGCAGGCAGGCAACCg > 1:3656813/1‑45 (MQ=255) gccacATATGGGCTGGAATCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAg > 1:3110443/1‑55 (MQ=255) gccacATATGGGCTGGAATCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAg > 1:4415626/1‑55 (MQ=255) gccacATATGGGCTGGAATCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAg > 1:874499/1‑55 (MQ=255) gccacATATGGGCTGGAATCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAg > 1:660261/1‑55 (MQ=255) gccacATATGGGCTGGAATCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAg > 1:1545083/1‑55 (MQ=255) gccacATATGGGCTGGAATCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAg > 1:4979059/1‑55 (MQ=255) gccacATATGGGCTGGAATCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAg > 1:3116077/1‑55 (MQ=255) gccacATATGGGCTGGAATCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAg > 1:3398674/1‑55 (MQ=255) gccacATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGgcg > 1:3576097/1‑71 (MQ=255) atatGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGtac > 1:3983549/1‑71 (MQ=255) tGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGtacttt > 1:344275/1‑71 (MQ=255) tGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGtacttt > 1:63875/1‑71 (MQ=255) tGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGtacttt > 1:642908/1‑71 (MQ=255) ggCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGtactttt < 1:4552563/70‑1 (MQ=255) gCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGtacttttac < 1:706891/71‑1 (MQ=255) gCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGtacttttac < 1:4804575/71‑1 (MQ=255) gAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGTACTTTTACTTTg > 1:4387353/1‑71 (MQ=255) aaCCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGtacttttact < 1:1504140/67‑1 (MQ=255) aaCCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGtacttttact < 1:864501/67‑1 (MQ=255) aaCCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGtacttttact < 1:3545316/67‑1 (MQ=255) aCCGCGTTTACCCGCAGGCAGGCAACCGCGTGTTTCAGGGGATTGAAGACGGCGCGtacttttac < 1:4846054/65‑1 (MQ=255) aCCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGTACTTTTACTTTGtt < 1:4723316/71‑1 (MQ=255) aCCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGTACTTTTACTTTGtt < 1:1418300/71‑1 (MQ=255) | TCATCGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGTACTTTTACTTTGTT > Exported/1315105‑1315238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |