New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AP009048 1942762 =32 (0.640)3 (0.070) 3/94 NT 9.2% coding (588/1323 nt) yebA predicted peptidase
?AP009048 1942786 = 30 (0.650)coding (564/1323 nt) yebA predicted peptidase

TTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AP009048/1942835‑1942762
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAAAACCGTTAGCGGCAGTACGG  >  AP009048/1942786‑1942855
                                                                                                                                                
TTAAAATGCCCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGC                                                                           >  1:2367270/1‑71
TTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGC                                                                           >  1:1970657/1‑71
TTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGC                                                                           >  1:776150/1‑71
TTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGC                                                                           >  1:3941452/1‑71
   AAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT                                                                        <  1:2580865/71‑1
   AAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT                                                                        <  1:622386/71‑1
          CAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT                                                                        >  1:737462/1‑64
          CAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT                                                                        >  1:439176/1‑64
            GCGAAATGCAGCAAGGAGAGTGCTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT                                                                        >  1:2146146/1‑61
                  TGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT                                                                        <  1:901526/56‑1
                  TGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCT                                                                          <  1:1778356/54‑1
                              AGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT                                                                        <  1:2795613/44‑1
                                TGGGTTAACAATCTGCTGAAATGTACCGTCGGGGGAAGCTTT                                                                        <  1:4232742/42‑1
                                    TTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGC                                                                           <  1:2820673/35‑1
                                      AACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT                                                                        <  1:4148890/36‑1
                                                TGAAAGGTACCGTCGGGGGAAGCTTTCAGCAGATTGTTAACCCACTCTCCTTGCTGCAT                                       <  1:4307755/59‑1
                                                  AAAGGTACCGTCGGGGGAAGCTTTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTT                                     >  1:3323595/1‑59
                                                    AGGTACCGTCGGGGGAAGCTTTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTT                        >  1:3717095/1‑70
                                                                       TTTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTT                         <  1:3773361/50‑1
                                                                        TTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAAAACCGTTAGCGGCAGTACG   >  1:4562821/1‑71
                                                                        TTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAA                      >  1:746811/1‑52
                                                                        TTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTT                                     >  1:4220575/1‑37
                                                                        TTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTT                                     >  1:894484/1‑37
                                                                         TCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAAAACCGTTAGCGGCAGTAa    <  1:480500/69‑2
                                                                         TCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAAAACCGTTAGCGGCAGTACGG  >  1:845991/1‑71
                                                                                                                                                
TTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AP009048/1942835‑1942762
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAAAACCGTTAGCGGCAGTACGG  >  AP009048/1942786‑1942855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.