| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2970629 | 49 (0.980) | 4 (0.090) | 3/94 | NT | 8.1% | coding (377/1041 nt) | tas | predicted oxidoreductase, NADP(H)‑dependent aldo‑keto reductase |
| ? | AP009048 | = 2970640 | 46 (1.000) | coding (388/1041 nt) | tas | predicted oxidoreductase, NADP(H)‑dependent aldo‑keto reductase | |||||
ATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2970557‑2970629‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctGATAAAGATCGAGGTAA < AP009048/2970640‑2970624 ATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTAC < 1:1596998/71‑1 AGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTGATAAAGATCGAGGT > 1:3309472/1‑70 GCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTGATAAAGATCGAGGTAA > 1:1142654/1‑63 GCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTGATAAAGATCGAGGTAA > 1:14723/1‑63 GCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCT < 1:3612563/41‑1 TGACAGCCTCAAGCGCCTACAGACTGATTACCTGATAAAGATCGAGGT < 1:3319298/48‑1 ATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2970557‑2970629‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctGATAAAGATCGAGGTAA < AP009048/2970640‑2970624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |