| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 4058809 = | 56 (1.120) | 3 (0.070) | 3/90 | NT | 5.7% | coding (469/489 nt) | yhhY | predicted acetyltransferase |
| ? | AP009048 | 4058827 = | 50 (1.130) | coding (451/489 nt) | yhhY | predicted acetyltransferase | |||||
AAAAATACGGCTTTGAAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCATATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/4058883‑4058809‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catattCACCATTACGCAATGCGTACTTCTTACCAGTCCCTTCAATTTCAAAGCCGTATTTTTTATAGACCTT > AP009048/4058827‑4058893 AAAAATACGGCTTTGAAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCA > 1:4598881/1‑71AAAAATACGGCTTTGAAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCA > 1:4488120/1‑71AAAAATACGGCTTTGAAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCA > 1:2909228/1‑71 AAATACGGCTTTGAAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCATA > 1:3712481/1‑71 AATACGGCTTTGAAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCATAT < 1:1996326/71‑1 AAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCAT > 1:3977796/1‑57 ATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCATA < 1:204633/56‑1 GAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCATATT > 1:2166747/1‑55 GAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCATAT > 1:4002217/1‑54 GAATATGTCGATGCATATTCACCATTACGCAATGCGTACTTCTTACCAGTCCCT < 1:144915/54‑1 ATATGTCGATGCATATTCACCATTACGCAATGCGTACTTCTTACCAGTCCCTTCAAT > 1:105594/1‑57 TATGTCGATGCATATTCACCATTACGCAATGCGTACT < 1:151060/37‑1 ATATTCACCATTACGCAATGCGTACTTCTTACCAGTCCCTTCAATTTCAAAGC > 1:1296047/1‑53 ATATTCACCATTACGCAATGCGTACTTCTTACCAGTCCCTTCAATTTCAAA > 1:1963666/1‑51 ATATTCACCATTACGCAATGCGTACTTCTTACCAGTCCCT < 1:3027853/40‑1 TATTCACCATTACGCAATGCGTACTTCTTACCAGTCCCTTCAATTTCAA < 1:678798/49‑1 TATTCACCATTACGCAATGCGTACTTCTTACCAGTCCCTTC < 1:421768/41‑1 ATTCACCATTACGCAATGCGTACTTCTTACCTGTCCCTTCAATTTCAAAGCCGTATTTTTTATAGACCTT > 1:2422805/1‑70 AAAAATACGGCTTTGAAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCATATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/4058883‑4058809‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catattCACCATTACGCAATGCGTACTTCTTACCAGTCCCTTCAATTTCAAAGCCGTATTTTTTATAGACCTT > AP009048/4058827‑4058893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |