| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3931693 | 55 (1.100) | 3 (0.070) | 3/92 | NT | 5.7% | intergenic (+62/‑30) | eptB/proK | predicted metal dependent hydrolase/tRNA‑Pro |
| ? | AP009048 | = 3931711 | 50 (1.110) | intergenic (+80/‑12) | eptB/proK | predicted metal dependent hydrolase/tRNA‑Pro | |||||
CTAACTAAGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTGGTAGCGCACTTCGTTCGGGACG > AP009048/3931624‑3931763 | ctaactaaGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGt < 1:4332300/71‑1 (MQ=255) actaaGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATc > 1:101522/1‑71 (MQ=255) actaaGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATc < 1:881100/71‑1 (MQ=255) ctaaGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATc > 1:1100656/1‑70 (MQ=255) taaGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTg > 1:3809378/1‑71 (MQ=255) taaGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTg > 1:2374952/1‑71 (MQ=255) taaGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTg > 1:4471300/1‑71 (MQ=255) aGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTgcg < 1:1323431/71‑1 (MQ=255) aGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTgcg < 1:4105398/71‑1 (MQ=255) cGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTgcgc < 1:2278891/70‑1 (MQ=255) ctgctgACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGt > 1:2874987/1‑69 (MQ=255) ctgACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAg < 1:1202003/69‑1 (MQ=255) ctgACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGAt < 1:3798546/71‑1 (MQ=255) ctgACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGAt > 1:3703502/1‑71 (MQ=255) ctgACTTTCTCGCCGATCAAAAGGAATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGAt > 1:3249376/1‑71 (MQ=255) tgACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATg > 1:4503708/1‑71 (MQ=255) aCTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGcg < 1:3587650‑M2/71‑3 (MQ=255) aCTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGcg < 1:2077418‑M2/71‑3 (MQ=255) tttCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAg < 1:185678/64‑1 (MQ=255) tctcGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGcatcttactgcgcagatacgccct > 1:3719226‑M1/1‑47 (MQ=255) tctcGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGcgccc < 1:913848‑M2/70‑6 (MQ=255) tcGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCg > 1:2280665/1‑70 (MQ=255) gCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCa < 1:2242343/70‑1 (MQ=255) gCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCAt < 1:3145145/71‑1 (MQ=255) gCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCAt > 1:2894269/1‑71 (MQ=255) ccGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGcatcttactgcgcagatac < 1:427503‑M1/61‑20 (MQ=255) ccGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCAtt > 1:2791978/1‑71 (MQ=255) caaTCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTc < 1:2089369/69‑1 (MQ=255) cGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTc > 1:548031/1‑71 (MQ=255) gATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGa > 1:283619/1‑56 (MQ=255) aTCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTAt > 1:239212/1‑42 (MQ=255) aTCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCgg > 1:1541929/1‑71 (MQ=255) tCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGt > 1:670354/1‑71 (MQ=255) tCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGt > 1:996404/1‑71 (MQ=255) cAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTg > 1:3181135/1‑43 (MQ=255) cAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTc > 1:4071968/1‑67 (MQ=255) cAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGt > 1:147755/1‑70 (MQ=255) aaaaGGCATTTTGCTATTAAGGGATTGACGAGGGCGt < 1:1073595/37‑1 (MQ=255) aaaaGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTg < 1:4028223/70‑1 (MQ=255) aaaGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCAtt > 1:67855/1‑64 (MQ=255) aaaGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGAt > 1:3153527/1‑71 (MQ=255) aaGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGGGCAGTAAGATGCGCCCCGCATTCGGTGAtt < 1:1072389/71‑1 (MQ=255) aaGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGAtt < 1:4440984/71‑1 (MQ=255) ggCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCAtt > 1:3209588/1‑61 (MQ=255) ggCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTgg > 1:3526099/1‑71 (MQ=255) gCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGgc < 1:3425586/71‑1 (MQ=255) aTTTTGCTATTAAGGGATTGACGAGGGCGTATCTgcg < 1:907972/37‑1 (MQ=255) aTTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGt < 1:2804579/62‑1 (MQ=255) aTTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGgcg > 1:3627622/1‑70 (MQ=255) ttttGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGgcg > 1:3793232/1‑69 (MQ=255) ttttGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCa < 1:1218558/71‑1 (MQ=255) tttGCTATTAAGGGATTGACGAGGGCGcatcttactgcgcagatacg > 1:664674‑M1/1‑27 (MQ=255) tGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGcc > 1:2280474/1‑71 (MQ=255) tGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGc < 1:3671431/70‑1 (MQ=255) tGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGc > 1:2785902/1‑70 (MQ=255) aTTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTgg > 1:661090/1‑70 (MQ=255) ttAAGGGATTGACGAGGGCGTATCTGCGCAGTAAg < 1:3775680/35‑1 (MQ=255) ttAAGGGATTGACGAGGGCGTATCTGCGCAGTAAg < 1:306563/35‑1 (MQ=255) tAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGgc > 1:3130615/1‑59 (MQ=255) aaGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGcgcc < 1:2479430‑M2/40‑5 (MQ=255) ttGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGgcg > 1:2609523/1‑53 (MQ=255) ttGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTGGTAGCGCACtt < 1:690455/71‑1 (MQ=255) gACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTGGTAGCGCACttcg > 1:3712396/1‑71 (MQ=255) gACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTGGTAGCGCACttc < 1:1673132/70‑1 (MQ=255) aCGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGt < 1:269278/42‑1 (MQ=255) cGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGcc < 1:710492/54‑1 (MQ=255) gAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTc < 1:2960138/37‑1 (MQ=255) aGGGCGTATCTGCGCAGTAAGATGcgccctcgtcaatcccttaatagcaaaatgccttttgatcggcgaga > 1:3719226‑M2/1‑24 (MQ=255) aGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTGGTAGCGCACttcgttcg < 1:43409/71‑1 (MQ=255) gggCGcatcttactgcgcagatacgccctcgtcaatcccttaatagcaaaatgccttttgatcggcgaga < 1:913848‑M1/70‑66 (MQ=255) gggCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTGGTAGCGCACTTCGTTCgg > 1:2924985/1‑71 (MQ=255) ggCGcatcttactgcgcagatacgccctcgtcaatccctt < 1:2479430‑M1/40‑37 (MQ=255) ggCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTGGTAGCGCACttcgttc < 1:3681734/68‑1 (MQ=255) gCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTgg < 1:741996/52‑1 (MQ=255) cgcatcttactgcgcagatacgccctcgtcaatcccttaatagcaaaatgccttttgatcggcgagaaagt < 1:2077418‑M1/71‑70 (MQ=255) cgcatcttactgcgcagatacgccctcgtcaatcccttaatagcaaaatgccttttgatcggcgagaaagt < 1:3587650‑M1/71‑70 (MQ=255) cGTATCTGCGCAGTAAGATGcgccctcgtcaatcccttaatagcaaa > 1:664674‑M2/1‑20 (MQ=255) gTATCTGCGCAGTAAGATGcgccctcgtcaatcccttaatagcaaaatgccttttgatcgg < 1:427503‑M2/61‑43 (MQ=255) gTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGgc < 1:3718252/41‑1 (MQ=255) gTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTGGTAGCGCACTTCGTTCGGGAc > 1:1279235/1‑70 (MQ=255) gTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTGGTAGCGCACTTCGTTCGGGACg < 1:4098522/71‑1 (MQ=255) | CTAACTAAGCGGCCTGCTGACTTTCTCGCCGATCAAAAGGCATTTTGCTATTAAGGGATTGACGAGGGCGTATCTGCGCAGTAAGATGCGCCCCGCATTCGGTGATTGGCGCAGCCTGGTAGCGCACTTCGTTCGGGACG > AP009048/3931624‑3931763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |