| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2107348 | 46 (0.920) | 3 (0.070) | 3/92 | NT | 7.5% | coding (847/993 nt) | wbbI | conserved hypothetical protein |
| ? | AP009048 | = 2107390 | 32 (0.710) | coding (805/993 nt) | wbbI | conserved hypothetical protein | |||||
TCATGGAGTCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTGAAAGATAAAGAGATGTCT > AP009048/2107321‑2107458 | tCATGGAGTCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATg > 1:3272950‑M2/1‑70 (MQ=255) aTGGAGTCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATga < 1:1374207‑M2/70‑3 (MQ=255) aTGGAGTCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATga < 1:3522132‑M2/70‑3 (MQ=255) aTGGAGTCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATga > 1:3691943‑M2/1‑68 (MQ=255) tGGAGTCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATgaaa > 1:3246085‑M2/1‑67 (MQ=255) tGGAGTCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATgaaa > 1:4494035‑M2/1‑67 (MQ=255) gAGTCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATc > 1:329806/1‑71 (MQ=255) aGTCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATcc < 1:74527/71‑1 (MQ=255) tCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGc < 1:2501460/71‑1 (MQ=255) tCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGc < 1:4539719/71‑1 (MQ=255) tCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATATACAATGAAATCCGc < 1:2370267/71‑1 (MQ=255) aacaaTCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGc < 1:4616269/69‑1 (MQ=255) caaTCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAgg < 1:3913172/71‑1 (MQ=255) caaTCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAgg < 1:3305336/71‑1 (MQ=255) aTCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGggc < 1:3058339/71‑1 (MQ=255) aTCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGggc > 1:337709/1‑71 (MQ=255) aTCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGggc > 1:671519/1‑71 (MQ=255) tctTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATgaaat < 1:1761196‑M2/58‑6 (MQ=255) gCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCttt < 1:3127852/70‑1 (MQ=255) aTTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATc < 1:940546/71‑1 (MQ=255) tttCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAg > 1:1757284/1‑58 (MQ=255) ttCTTTGATTGATGCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGAAAGGGCGGCTTTATcc > 1:503001/1‑70 (MQ=255) ttCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTAt > 1:2007110/1‑68 (MQ=255) tCTTTGATTTATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCa < 1:1443605/54‑1 (MQ=255) tCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCaa > 1:2890489/1‑55 (MQ=255) cTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAAt < 1:3886078/43‑1 (MQ=255) tgattgatCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCata > 1:3896043/1‑69 (MQ=255) tgattgatCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCat < 1:912916/68‑1 (MQ=255) attgatCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCaa < 1:3639235/49‑1 (MQ=255) ttgatCCCACTGCATATCCTATTCTATTATCTACAATgaaatgcaagagattgttga < 1:1704354‑M2/57‑21 (MQ=255) tgatCCCACTGCGTATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATa > 1:95563/1‑71 (MQ=255) tgatCCCACTGCATATCCTATTCTATTATCTACAATgaaatccgcaagggattgttgactccatgacaa < 1:29583‑M2/69‑34 (MQ=255) gatCCCACTGCATATCCTATTCTATTATCTACAATgaaa < 1:1333102‑M2/39‑5 (MQ=255) atCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATAc < 1:2093163/70‑1 (MQ=255) cccACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCa > 1:4012764/1‑59 (MQ=255) ccACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTgg < 1:3925355/70‑1 (MQ=255) ccACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTgg > 1:2082284/1‑70 (MQ=255) gCATATCCTATTCTATTATCTACAATgaaatgcaagagattgttgactccatgacaat < 1:2281737‑M2/58‑33 (MQ=255) cATATCCTATTCTATTATCTACAATGAAATCCGCAAgg < 1:2292731/38‑1 (MQ=255) tatCCTATTCTATTATCTACAATGAAATCCGCAAGggcggc < 1:1359230/41‑1 (MQ=255) tatCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATc < 1:1214043/47‑1 (MQ=255) atCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTAt < 1:616653/45‑1 (MQ=255) atCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCAtt > 1:2813016/1‑71 (MQ=255) tCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATaaa < 1:4610898/54‑1 (MQ=255) tCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTg < 1:1542052/71‑1 (MQ=255) ctattctattATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTGa < 1:142249/70‑1 (MQ=255) ttctattATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTGa > 1:644252/1‑67 (MQ=255) tctattATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTGAAAGa > 1:320225/1‑70 (MQ=255) ctattATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTGAAAGAt > 1:1563118/1‑70 (MQ=255) ctattATCTACAATGAAATCCG‑AAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTGAAAGAt > 1:2924185/1‑69 (MQ=255) tACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTGAAAGATAAAGAGATg > 1:3279774/1‑71 (MQ=255) cAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATa > 1:4215545/1‑39 (MQ=255) aaTGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTGAAAGATa < 1:3010550/60‑1 (MQ=255) aaTGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTGAAAGATAAAGAGATGTCt > 1:1045971/1‑71 (MQ=255) aTGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCa > 1:3770239/1‑49 (MQ=255) aTGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCa > 1:3765012/1‑49 (MQ=255) | TCATGGAGTCAACAATCTCTTGCATTTCTTTGATTGATCCCACTGCATATCCTATTCTATTATCTACAATGAAATCCGCAAGGGCGGCTTTATCCCATATAAATACTGGAAGTTCCATTGAAAGATAAAGAGATGTCT > AP009048/2107321‑2107458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |