| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2373655 = | 40 (0.800) | 3 (0.070) | 3/94 | NT | 6.8% | coding (947/1983 nt) | yfbG | fused UDP‑L‑Ara4N formyltransferase and UDP‑GlcA C‑4'‑decarboxylase |
| ? | AP009048 | 2373675 = | 45 (0.980) | coding (967/1983 nt) | yfbG | fused UDP‑L‑Ara4N formyltransferase and UDP‑GlcA C‑4'‑decarboxylase | |||||
AGGTTCACGCTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGAAGTTTACGG > AP009048/2373608‑2373742 | aGGTTCACGCTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGa < 1:1743025/71‑1 (MQ=255) cgcgcagcaggcgttctgtcagatggttgccaataaagccattcacCCCGGGTACTCATCCTCgggg > 1:3549325‑M1/47‑67 (MQ=255) tCACGCTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATgg > 1:438178/1‑71 (MQ=255) cACGCTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATgg < 1:1138791/70‑1 (MQ=255) gCTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCttt < 1:637197/71‑1 (MQ=255) cTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGTGTGAATGGCt < 1:1572283/68‑1 (MQ=255) cTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGTGTGAATGGCt < 1:1577557/68‑1 (MQ=255) cTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTa < 1:1232413/71‑1 (MQ=255) cTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTa < 1:4466655/71‑1 (MQ=255) ttGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTAt > 1:2444104/1‑71 (MQ=255) ttGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTAt > 1:3723650/1‑71 (MQ=255) gAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTg > 1:3362275/1‑71 (MQ=255) gAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCAGGGTACTCATCCTCGGGGTGAATGGCTTTAt < 1:379333/69‑1 (MQ=255) cagccTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCtt < 1:800991/59‑1 (MQ=255) agccTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGt > 1:486889/1‑49 (MQ=255) gcctgcctGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTa > 1:386022/1‑59 (MQ=255) gcctgcctGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATc > 1:4169547/1‑71 (MQ=255) cctgcctgCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATc > 1:3467610/1‑70 (MQ=255) cctgcctgCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCt > 1:4506362/1‑71 (MQ=255) cctgcctgCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCt < 1:2425830/71‑1 (MQ=255) tgcctgcACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGt > 1:648491/1‑45 (MQ=255) cctgcACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGaa > 1:3166241/1‑46 (MQ=255) ctgcACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAg < 1:1048370/71‑1 (MQ=255) tgcACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTg < 1:1312363/55‑1 (MQ=255) gcACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAgca > 1:3040782/1‑69 (MQ=255) gcACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGaa > 1:983625/1‑71 (MQ=255) ccaataaagccattcacCCCGGGTACTCATCCTCGGGGTg > 1:4256055‑M1/18‑40 (MQ=255) cACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGa < 1:2634572/69‑1 (MQ=255) aCCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCtt < 1:2637242/47‑1 (MQ=255) aCCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCt < 1:783755/62‑1 (MQ=255) aCCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCt > 1:1513610/1‑62 (MQ=255) cccGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCttt > 1:3666719/1‑44 (MQ=255) gACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCctgct > 1:1201108/1‑70 (MQ=255) aCGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTg < 1:3660055/55‑1 (MQ=255) aCGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCtgctgc > 1:3883145/1‑71 (MQ=255) gCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGAc > 1:1255242/1‑55 (MQ=255) ccGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGcgcg < 1:1407021/71‑1 (MQ=255) cGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGa < 1:2264416/71‑1 (MQ=255) gTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGcgcg > 1:1877066/1‑69 (MQ=255) caccccgaggatgagtacccgggGTGAATGGCTTTATTgg > 1:4256055‑M2/24‑40 (MQ=255) tACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTgg < 1:805985/39‑1 (MQ=255) tACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCa < 1:2937290/45‑1 (MQ=255) ccccgaggatgagtacccgggGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGcgcg > 1:3549325‑M2/22‑67 (MQ=255) aCCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGcgcg > 1:866994/1‑67 (MQ=255) aCCCGGATACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGcgcg > 1:596986/1‑67 (MQ=255) CCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGcgcg < 1:621377‑M1/66‑1 (MQ=255) CCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGAt > 1:2367541‑M1/1‑71 (MQ=255) CCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAg > 1:2760566‑M1/1‑50 (MQ=255) CCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCct > 1:4577109‑M1/1‑57 (MQ=255) cgaggatgagtacccgggGTGAATGGCTTTATTGGCAACCATc > 1:2391591‑M2/19‑43 (MQ=255) CGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCa > 1:3347292‑M1/1‑71 (MQ=255) GGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCAt < 1:3737334‑M1/71‑1 (MQ=255) GGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCAt > 1:3371286‑M1/1‑71 (MQ=255) GGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCAt > 1:2847500‑M1/1‑71 (MQ=255) ggTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCAtt < 1:1122662/71‑1 (MQ=255) ggTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCAt < 1:3145761/70‑1 (MQ=255) aCTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGa < 1:4533323/60‑1 (MQ=255) cTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATg < 1:2743646/70‑1 (MQ=255) cTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATg < 1:2236495/70‑1 (MQ=255) cTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGa < 1:742915/71‑1 (MQ=255) tCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTg < 1:2415090/38‑1 (MQ=255) tCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACg < 1:980321/46‑1 (MQ=255) aTCCTCGGGGTGAATGGCTTTATTGGCTACCAGCTGACAGAACGCCTGCTGCGCGAAGa > 1:2567744/1‑59 (MQ=39) aTCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACa < 1:2869433/39‑1 (MQ=255) aTCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGAAGt > 1:3379549/1‑71 (MQ=255) ccTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGa > 1:4142035/1‑57 (MQ=255) ccTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGAAGtt > 1:3992159/1‑70 (MQ=255) cTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGaa > 1:3408388/1‑39 (MQ=255) cTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGAAGTTTa < 1:1965913/71‑1 (MQ=255) cgggGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGAAGTTTa > 1:4093685‑M2/5‑69 (MQ=255) cgggGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGAAGTTTACg > 1:171964‑M2/5‑71 (MQ=255) gggGTGAATGGCTTTATTGGCAACCATCTGACAGaa > 1:4102385‑M2/4‑36 (MQ=255) gggGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGAAGTTTACgg > 1:4097207‑M2/4‑71 (MQ=255) gTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGa < 1:2698453/50‑1 (MQ=255) | AGGTTCACGCTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGAAGTTTACGG > AP009048/2373608‑2373742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |