| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 603740 | 34 (0.560) | 3 (0.070) | 3/72 | NT | 9.2% | intergenic (+22/‑188) | ycaD/ycaM | predicted transporter/predicted transporter |
| ? | Exported | = 603748 | 35 (0.790) | intergenic (+30/‑180) | ycaD/ycaM | predicted transporter/predicted transporter | |||||
Only 100 of 104 total aligned reads displayed.
GCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTA > Exported/603670‑603810 | gctgctgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAA > 1:3215848‑M1/1‑71 (MQ=255) ctgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTa < 1:3032908/71‑1 (MQ=255) ctgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTa < 1:1465020/71‑1 (MQ=255) ctgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTa > 1:435930/1‑71 (MQ=255) ctgcGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTa < 1:1417171/71‑1 (MQ=255) cAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTt < 1:1974210‑M2/71‑2 (MQ=255) cAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTt < 1:3178060‑M2/71‑2 (MQ=255) aaCGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAAacagtaagtt > 1:3037998‑M1/1‑61 (MQ=255) aaCGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTtt > 1:1673485‑M2/1‑69 (MQ=255) cGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttca > 1:1229502‑M2/1‑67 (MQ=255) cGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAAacagtaagttcacac < 1:2292466‑M1/71‑16 (MQ=255) gTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAAacagtaagttcacactc < 1:261908‑M1/71‑18 (MQ=255) gTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttcacactc < 1:2082553‑M2/71‑10 (MQ=255) gTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttcacactc < 1:417678‑M2/71‑10 (MQ=255) tCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttcaca > 1:505820‑M2/1‑61 (MQ=255) cATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttca > 1:3052958‑M2/1‑60 (MQ=255) aCGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttcacactct < 1:1645773‑M2/67‑11 (MQ=255) cGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttca < 1:2436218‑M2/60‑5 (MQ=255) cGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttca < 1:422514‑M2/60‑5 (MQ=255) cGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCttt > 1:1778903/1‑71 (MQ=255) cGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCttt > 1:2156159/1‑71 (MQ=255) ccGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttcacactc > 1:2553357‑M2/1‑54 (MQ=255) ccGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttcacactc > 1:3309143‑M2/1‑54 (MQ=255) ccGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttcacactc > 1:1893273‑M2/1‑54 (MQ=255) ccGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttcacactc > 1:2516306‑M2/1‑54 (MQ=255) ccGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttcacactc > 1:3805989‑M2/1‑54 (MQ=255) cGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttttt < 1:2863121/71‑1 (MQ=255) gAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTtt > 1:1470485‑M2/1‑52 (MQ=255) gAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTtt > 1:1398487‑M2/1‑52 (MQ=255) gAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTtt > 1:3521059‑M2/1‑52 (MQ=255) gAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTtt > 1:1356863‑M2/1‑52 (MQ=255) aaCCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttca < 1:3312765‑M2/54‑5 (MQ=255) aaCCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttca < 1:2243105‑M2/54‑5 (MQ=255) aaCCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttca < 1:554127‑M2/54‑5 (MQ=255) aaCCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGtt < 1:1264203/71‑1 (MQ=255) cccGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTttc > 1:706986/1‑71 (MQ=255) cGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTttca > 1:3707360‑M2/1‑46 (MQ=255) gTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTttcttc > 1:1284031/1‑71 (MQ=255) ttGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACt < 1:3482875/42‑1 (MQ=255) ttGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTtcttct < 1:3626064/71‑1 (MQ=255) ttGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTtcttct < 1:3027175/71‑1 (MQ=255) gCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTa > 1:2637163/1‑70 (MQ=255) gCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTa > 1:2764632/1‑70 (MQ=255) gCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTAt > 1:1546038/1‑71 (MQ=255) aCGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGa > 1:2661533/1‑71 (MQ=255) aCGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGa < 1:3436188/71‑1 (MQ=255) aCGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGa < 1:3177740/71‑1 (MQ=255) aCGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGa < 1:1208516/71‑1 (MQ=255) gtAAATGAATTCAAGCAGAGTGTGAACTTACTGTttca > 1:2399058‑M2/1‑34 (MQ=255) gtAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACtt > 1:513498/1‑70 (MQ=255) gtAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTg > 1:2701179/1‑71 (MQ=255) tAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGa > 1:1716579/1‑66 (MQ=255) aaTGAATTCAAGCAGAGTGTGAACTTACTGTttcaca < 1:2468463‑M2/37‑7 (MQ=255) aTGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGAc > 1:2660389/1‑64 (MQ=255) aTGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCtt > 1:1927311/1‑70 (MQ=255) aTGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCtt > 1:2588285/1‑70 (MQ=255) ttCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCtttt < 1:3772830/41‑1 (MQ=255) cAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCa < 1:2074927/70‑1 (MQ=255) aaGCAGAGTGTGAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgt < 1:1809705‑M1/71‑58 (MQ=255) gCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAAtt < 1:3484590/71‑1 (MQ=255) agagTGTGAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgt < 1:1645773‑M1/67‑58 (MQ=255) agagTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAAtttt < 1:2538086/71‑1 (MQ=255) agagTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAAtttt < 1:3833941/71‑1 (MQ=255) gagTGTGAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatgac < 1:2082553‑M1/71‑63 (MQ=255) gagTGTGAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatgac < 1:417678‑M1/71‑63 (MQ=255) gagTGTGAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcgg > 1:2516306‑M1/1‑9 (MQ=255) gagTGTGAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcgg > 1:3805989‑M1/1‑9 (MQ=255) gagTGTGAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcgg > 1:1893273‑M1/1‑9 (MQ=255) gagTGTGAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcgg > 1:3309143‑M1/1‑9 (MQ=255) gagTGTGAACTTACTGTttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatgac < 1:261908‑M2/71‑55 (MQ=255) gagTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTa > 1:276258/1‑71 (MQ=255) agTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAAttt < 1:119511/68‑1 (MQ=255) agTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAAttt < 1:2165431/68‑1 (MQ=255) gtgtGAACTTACTGTttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatgaccg < 1:2292466‑M2/71‑57 (MQ=255) gtgtGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTAtt > 1:143702/1‑71 (MQ=255) tgtgAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatga > 1:505820‑M1/1‑6 (MQ=255) tgtgAAacagtaagttcacactctgcttgaattcatt < 1:2468463‑M1/37‑32 (MQ=255) tgtgAACTTACTGTTTCACACTCTGCTTTTTTGtt < 1:2086170/35‑1 (MQ=255) tgtgAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTa > 1:1088299/1‑68 (MQ=255) tgAAacattaagttcacactctgcttgaattcatttacacgtgagcaacgggtt < 1:79811‑M1/54‑51 (MQ=255) tgAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatgaccggcg > 1:1229502‑M1/1‑4 (MQ=255) tgAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatg > 1:3052958‑M1/1‑4 (MQ=255) tgAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcg < 1:2436218‑M1/60‑57 (MQ=255) tgAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcg < 1:422514‑M1/60‑57 (MQ=255) tgAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtt < 1:3312765‑M1/54‑51 (MQ=255) tgAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtt < 1:554127‑M1/54‑51 (MQ=255) tgAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtt < 1:2243105‑M1/54‑51 (MQ=255) tgAAacagtaagttcacactctgcttgaattcatttacacgtgagcaacg > 1:3707360‑M1/1‑4 (MQ=255) tgAAacagtaagttcacactctgcttgaattcatttac > 1:2399058‑M1/1‑4 (MQ=255) tgAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGt > 1:1865839/1‑71 (MQ=255) tgAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGt > 1:1763374/1‑71 (MQ=255) gAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGa < 1:697204/44‑1 (MQ=255) aaacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatgaccggcgtt > 1:1673485‑M1/1‑2 (MQ=255) aaacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttc > 1:1470485‑M1/1‑2 (MQ=255) aaacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttc > 1:1398487‑M1/1‑2 (MQ=255) aaacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttc > 1:1356863‑M1/1‑2 (MQ=255) aaacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttc > 1:3521059‑M1/1‑2 (MQ=255) aaCTTACTGTttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatgaccggcgtt > 1:3037998‑M2/1‑10 (MQ=255) aacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatgaccggcgttg < 1:1974210‑M1/71‑71 (MQ=255) aacagtaagttcacactctgcttgaattcatttacacgtgagcaacgggtttcggcgtatgaccggcgttg < 1:3178060‑M1/71‑71 (MQ=255) | GCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAAATGAATTCAAGCAGAGTGTGAACTTACTGTTTCACACTCTGCTTTTTTGTTTCTTCTATCTGACTTGCTTTATTCCAAATTTTATTCGTTTA > Exported/603670‑603810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |