| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1537671 | 73 (1.190) | 9 (0.170) | 3/88 | NT | 10.7% | coding (834/897 nt) | yfcT | predicted outer membrane export usher protein |
| ? | Exported | = 1537689 | 86 (1.600) | coding (816/897 nt) | yfcT | predicted outer membrane export usher protein | |||||
Only 100 of 128 total aligned reads displayed.
TCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCTGGCATGGCAGTAACAAGC > Exported/1537603‑1537741 | tCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AAt < 1:3004721/71‑1 (MQ=255) aCGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGa > 1:3350171/1‑71 (MQ=255) cGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑aa > 1:476927/1‑67 (MQ=255) cGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGa > 1:3154803/1‑70 (MQ=255) gTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACa < 1:958564/71‑1 (MQ=255) gTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACa < 1:126246/71‑1 (MQ=255) gTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACa < 1:3843582/71‑1 (MQ=255) ttATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAg > 1:2382634/1‑71 (MQ=255) ttGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCt < 1:2573571/71‑1 (MQ=255) ttGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCt < 1:1179480/71‑1 (MQ=255) aGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGt > 1:3693954/1‑71 (MQ=255) gCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGt > 1:3355706/1‑70 (MQ=255) aaacagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑Atgacataaagcctgtcatt > 1:84707‑M1/1‑50 (MQ=255) aaacagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑Atgacataaagcctgtcatt > 1:1449132‑M1/1‑50 (MQ=255) aaacagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑Atgacataaagcctgtcatt > 1:2287955‑M1/1‑50 (MQ=255) aaacagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑Atgacataaagcctgtcat > 1:3468393‑M1/1‑50 (MQ=255) aaacagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCAtc > 1:2105164‑M2/1‑68 (MQ=255) aaacagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCAt < 1:2589143‑M2/69‑2 (MQ=255) aacagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCAtcag < 1:574578‑M2/71‑5 (MQ=255) acagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGa > 1:2511965/1‑52 (MQ=255) acagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCtt < 1:3651662/59‑1 (MQ=255) acagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCAtcagg > 1:1693678‑M2/1‑66 (MQ=255) acagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCAtcagg > 1:3163126‑M2/1‑66 (MQ=255) acagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCAtcagg > 1:1036525‑M2/1‑66 (MQ=255) acagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCAtcag < 1:3378155‑M2/70‑5 (MQ=255) cagaaacagGGGGATCTGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑Atgacataaagcctgtcattcagga < 1:2347011‑M1/71‑25 (MQ=255) cagaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCAtca < 1:959656‑M2/68‑4 (MQ=255) gaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACa > 1:2786871/1‑51 (MQ=255) gaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACa > 1:3423837/1‑51 (MQ=255) gaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGtc < 1:2098230/62‑1 (MQ=255) gaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGtc < 1:2561742/62‑1 (MQ=255) gaaacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGaa > 1:2842796/1‑70 (MQ=255) aacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAAtgacataaagcctgtcatt > 1:1020933‑M1/1‑44 (MQ=255) aacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAAtgacataaagcctgtcatt > 1:3611904‑M1/1‑44 (MQ=255) aacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTGAAtgacataaagcctgtcatt > 1:3004917‑M1/1‑44 (MQ=255) aacagGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGaacaa < 1:87170/71‑1 (MQ=255) agGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCg > 1:3358205/1‑71 (MQ=255) gggggATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCgg < 1:1499472/71‑1 (MQ=255) gggggATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCgg < 1:2905476/71‑1 (MQ=255) ggggATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGgc < 1:2296446/71‑1 (MQ=255) ggggATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGgc < 1:887885/71‑1 (MQ=255) ggggATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGgc < 1:1534855/71‑1 (MQ=255) ggggATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGgc < 1:2788720/71‑1 (MQ=255) ggggATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGgc < 1:2502843/71‑1 (MQ=255) gggATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACa < 1:513994/43‑1 (MQ=255) aTCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCg < 1:2842862/65‑1 (MQ=255) tgggtgTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCAt > 1:2596549‑M2/1‑47 (MQ=255) ggtgTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGcc > 1:1781697/1‑71 (MQ=255) tgtCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCtt < 1:81009/71‑1 (MQ=255) tgtCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCtt < 1:3191285/71‑1 (MQ=255) gtCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGAc < 1:518331/62‑1 (MQ=255) gtCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCt < 1:500920/69‑1 (MQ=255) tCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCttt < 1:2029438/70‑1 (MQ=255) tCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCttt < 1:3191488/70‑1 (MQ=255) tCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTa > 1:933728/1‑71 (MQ=255) aCCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATg < 1:1273330/71‑1 (MQ=255) ccTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGc < 1:1989179/71‑1 (MQ=255) cTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCtt < 1:3151125/65‑1 (MQ=255) cTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCt < 1:1036428/71‑1 (MQ=255) cTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCt < 1:477694/71‑1 (MQ=255) tGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtg > 1:1913494/1‑71 (MQ=255) tGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtg > 1:1107186/1‑71 (MQ=255) tGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtg > 1:2747936/1‑71 (MQ=255) ttGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtggc < 1:3059103/71‑1 (MQ=255) ttGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtgg < 1:3260630/70‑1 (MQ=255) gCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGCACAACCGGCGCGACGTTGCCTTTATGCtggcat > 1:2494312/1‑71 (MQ=255) gCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtggcat > 1:3702833/1‑71 (MQ=255) gTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtggcatgg < 1:90863/71‑1 (MQ=255) tCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGaacaac < 1:2096649/40‑1 (MQ=255) tCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGaacaac < 1:1103183/40‑1 (MQ=255) tCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtggcatggc < 1:100935/71‑1 (MQ=255) cTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtggcatgg > 1:944025/1‑69 (MQ=255) tGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtggcat > 1:1880946/1‑66 (MQ=255) tGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCTGGCATGGCAg > 1:883066/1‑71 (MQ=255) cTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACg < 1:2918621/46‑1 (MQ=255) cTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACg < 1:1862764/46‑1 (MQ=255) cTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCtggcatggca < 1:3022977/68‑1 (MQ=255) tCCTG‑AATGACAGGCTTTATGTCAtcaggagcagacgcaacaggtgacacccaccgatccccctgtttctg < 1:1575373‑M2/71‑48 (MQ=255) tCCTG‑AATGACAGGCTTTATGTCAtcaggagcagacgcaacaggtgacacccacagatccccctgtttctg < 1:2347011‑M2/71‑48 (MQ=255) tCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCgg < 1:3431596/38‑1 (MQ=255) ccTG‑Atgacataaagcctgtcattcaggagcagacgcaacaggtgacacccaccgatccccctgtttctgt > 1:2060917‑M1/1‑5 (MQ=255) ccTG‑Atgacataaagcctgtcattcaggagcagacgcaacaggtgacacccaccgatccccctgtttctgt > 1:1693678‑M1/1‑5 (MQ=255) cTG‑Atgacataaagcctgtcattcaggagcagacgcaacaggtgacacccaccgatccccctgtttctgtt < 1:574578‑M1/71‑68 (MQ=255) cTG‑Atgacataaagcctgtcattcaggagcagacgcaacaggtgacacccaccgatccccctgtttctgt < 1:3378155‑M1/70‑67 (MQ=255) cTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATg < 1:921594/54‑1 (MQ=255) cTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATg < 1:3450105/54‑1 (MQ=255) cTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCTGGCATGGCAGTaa < 1:2703990/69‑1 (MQ=255) cTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCTGGCATGGCAGTAAc > 1:2686267/1‑70 (MQ=255) tg‑atgacataaagcctgtcattcaggagcagacgcaacaggtgacacccaccgatccccctgtttctg < 1:959656‑M1/68‑66 (MQ=255) g‑atgacataaagcctgtcattcaggagcagacgcaacaggtgacacccaccgatccccctgtttctgttt > 1:2105164‑M1/1‑2 (MQ=255) g‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTa > 1:3634499/1‑50 (MQ=255) atgacataaagcctgtcattcaggagcagacgcaacaggtgacacccaccgatccccctgtttctgttt < 1:2589143‑M1/69‑69 (MQ=255) atgacataaagcctgtcattcaggagcagacgcaacaggtgacacccaccgatccccctgtttctgttt > 1:2343343‑M1/1‑1 (MQ=255) atgacataaagcctgtcattcaggagcagacgcaacaggtgacaccca > 1:2596549‑M1/1‑1 (MQ=255) aaTGACAGGCTTTATGTCAttcaggagcagacgcaacaggtgacacccaccgatccccctgtt > 1:1020933‑M2/1‑19 (MQ=255) aaTGACAGGCTTTATGTCAttcaggagcagacgcaacaggtgacacccaccgatccccctgtt > 1:3004917‑M2/1‑19 (MQ=255) aaTGACAGGCTTTATGTCAtcaggagcagacgcaacaggtgacacccaccgatccccctgtttctgttt > 1:2287955‑M2/1‑19 (MQ=255) aaTGACAGGCTTTATGTCAtcaggagcagacgcaacaggtgacacccaccgatccccctgtttctgttt > 1:1449132‑M2/1‑19 (MQ=255) aaTGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCTGGCATGGCAGTAACaa < 1:1352010/69‑1 (MQ=255) aaTGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCTGGCATGGCAGTAACAAGc > 1:3797010/1‑71 (MQ=255) | TCACGTTATTGGTTAGCTGAAACAGAAACAGGGGGATCGGTGGGTGTCACCTGTTGCGTCTGCTCCTG‑AATGACAGGCTTTATGTCATCAGGAACAACCGGCGCGACGTTGCCTTTATGCTGGCATGGCAGTAACAAGC > Exported/1537603‑1537741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |