New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Exported	391476 =	44 (0.600)	6 (0.090)	3/94	NT	11.0%	intergenic (‑10/+137)	ybdN/ybdO	conserved hypothetical protein/predicted DNA‑binding transcriptional regulator
	?	Exported	391506 =	56 (0.810)					intergenic (‑40/+107)	ybdN/ybdO	conserved hypothetical protein/predicted DNA‑binding transcriptional regulator

ACACTCTGCTTTACAGTGTTTACTTTATAATTAACAGACTTATCTCACTGATCACCCTGTAACGTTCAGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/391548‑391476 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCATTCGCGCTGTGAATAA  >  Exported/391506‑391575                                                                                                                                                 ACACTCTGCTTTACAGTGTTTACTTTATAATTAACAGACTTATCTCACTGATCACCCTGTAACGTTCAGAG                                                                          <  1:3357198/71‑1                                               ACTGATCACCCTGTAACGTTCAGAGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTT                            >  1:1405075/1‑71                                               ACTGATCACCCTGTAACGTTCAGAGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTT                            >  1:2262663/1‑71                                               ACTGATCACCCTGTAACGTTCAGAGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTT                            >  1:3216455/1‑71                                               ACTGATCACCCTGTAACGTTCAGAGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGT                               <  1:726390/68‑1                                                 TGATCACCCTGTAACGTTCAGAGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGT                             >  1:1167650/1‑68                                                 TGATCACCCTGTAACGTTCAGAGAGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGT                             >  1:545395/1‑68                                                                        AGATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCA                  >  1:4148728/1‑56                                                                         GATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCATTCGCGCTGTGAATAA  <  1:4270805/71‑1                                                                                                                                                 ACACTCTGCTTTACAGTGTTTACTTTATAATTAACAGACTTATCTCACTGATCACCCTGTAACGTTCAGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/391548‑391476 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagATAAGTCTGTTAATTATAAAGTAAACACTGTAAAGCAGAGTGTTTTATTTTTCATTCGCGCTGTGAATAA  >  Exported/391506‑391575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.