Predicted mutation
evidence seq id position mutation freq annotation gene description
RA Exported 1,187,540 G→A 12.5% G10R (GGG→AGG)  yeaI → predicted diguanylate cyclase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*Exported1,187,5400GA12.5% 248.2 / 22.6 89G10R (GGG→AGG) yeaIpredicted diguanylate cyclase
Reads supporting (aligned to +/- strand):  ref base G (41/36);  new base A (5/6);  total (46/43)
Fisher's exact test for biased strand distribution p-value = 7.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.75e-01

TACATAATTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATATCTCTG  >  Exported/1187476‑1187605
                                                                |                                                                 
tACATAATTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTAt                                                             >  1:3949582/1‑71 (MQ=255)
tACATAATTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTAt                                                             >  1:2429614/1‑71 (MQ=255)
 aCATAATTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTAtt                                                            >  1:4226744/1‑71 (MQ=255)
 aCATAATTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTAt                                                             >  1:1128665/1‑70 (MQ=255)
    tAATTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGAGGTTATTCtt                                                         >  1:867098/1‑71 (MQ=255)
    tAATTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGAGGTTATTCtt                                                         >  1:4688129/1‑71 (MQ=255)
    tAATTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGAGGTTATTCtt                                                         >  1:3933330/1‑71 (MQ=255)
    tAATTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGAGGTTAATCtt                                                         >  1:141262/1‑71 (MQ=255)
     aaTTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCtt                                                         >  1:2714876/1‑70 (MQ=255)
       tttAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCtt                                                         >  1:528843/1‑68 (MQ=255)
       tttAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTa                                                       >  1:486970/1‑70 (MQ=255)
       tttAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTa                                                       >  1:3128477/1‑70 (MQ=255)
         tAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTaaa                                                     >  1:1900597/1‑70 (MQ=255)
            ttCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGt                                                                <  1:3675204/56‑1 (MQ=255)
            ttCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAat                                                    <  1:4286815/68‑1 (MQ=255)
            ttCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAat                                                    <  1:2180204/68‑1 (MQ=255)
              ccAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATAtttt                                               >  1:2820618/1‑71 (MQ=255)
              ccAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATAttt                                                <  1:4577025/70‑1 (MQ=255)
               cAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATAttttt                                              <  1:537148/71‑1 (MQ=255)
               cAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATAttttt                                              >  1:1320833/1‑71 (MQ=255)
                aGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATAtttttt                                             <  1:2438245/71‑1 (MQ=255)
                  aaaaCAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGtt                                                               >  1:2230681/1‑51 (MQ=255)
                  aaaaCAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTAt                                           >  1:4471946/1‑71 (MQ=255)
                   aaaCAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATc                                          <  1:3955979/71‑1 (MQ=255)
                   aaaCAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGAGGTTATTCttt                                                        <  1:1286724/57‑1 (MQ=255)
                    aaCAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCg                                         >  1:1000286/1‑71 (MQ=255)
                    aaCAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCg                                         >  1:1393370/1‑71 (MQ=255)
                     aCAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGAGGTTATTCTTTaa                                                      >  1:3307299/1‑57 (MQ=255)
                      cAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGtt                                       <  1:1860336/71‑1 (MQ=255)
                      cAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGtt                                       <  1:1320167/71‑1 (MQ=255)
                      cAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGtt                                       <  1:1314748/71‑1 (MQ=255)
                      cAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGtt                                       <  1:3725119/71‑1 (MQ=255)
                       aaTCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTa                                            <  1:3799582/65‑1 (MQ=255)
                       aaTCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATc                                          >  1:257374/1‑67 (MQ=255)
                          cATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAAc                                    >  1:1996490/1‑70 (MQ=255)
                            ttCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGaa                                 <  1:1081690/71‑1 (MQ=255)
                            ttCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGaa                                 <  1:4334450/71‑1 (MQ=255)
                              cGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGaaaa                               >  1:4241032/1‑71 (MQ=255)
                              cGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGaaaa                               >  1:3108669/1‑71 (MQ=255)
                              cGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGaaaa                               >  1:3152511/1‑71 (MQ=255)
                                 aaaaaTGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTg                            <  1:1874980/71‑1 (MQ=255)
                                 aaaaaTGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTg                            <  1:4358586/71‑1 (MQ=255)
                                 aaaaaTGATTCAGTCAACACGTATTTCCATGAGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTg                            <  1:3700148/71‑1 (MQ=255)
                                 aaaaaTGATTCAGTCAACACGTATTTCCATGAGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTg                            <  1:3838052/71‑1 (MQ=255)
                                 aaaaaTGATTCAGTCAACACGTATTTCCATGAGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTg                            <  1:367697/71‑1 (MQ=255)
                                 aaaaaTGATTCAGTCAACACGTATTTCCATGAGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTg                            <  1:338432/71‑1 (MQ=255)
                                 aaaaaTGATTCAGTCAACACGTATTTCCATGAGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTg                            <  1:3299487/71‑1 (MQ=255)
                                  aaaaTGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCg                                         >  1:2249694/1‑57 (MQ=255)
                                  aaaaTGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGa                           <  1:1107170/71‑1 (MQ=255)
                                  aaaaTGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGa                           <  1:3893615/71‑1 (MQ=255)
                                   aaaTGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGaa                                 <  1:2183534/64‑1 (MQ=255)
                                   aaaTGATTCAGTCAACACGTATTTCAATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGaa                                 <  1:1433079/64‑1 (MQ=255)
                                     aTGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATc                         >  1:1203995/1‑70 (MQ=255)
                                          tCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGt                    >  1:688555/1‑70 (MQ=255)
                                            aGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCaa                 <  1:4613959/71‑1 (MQ=255)
                                            aGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCaa                 <  1:229003/71‑1 (MQ=255)
                                             gTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCaaa                <  1:2490801/71‑1 (MQ=255)
                                              tCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATc                         <  1:1739605/61‑1 (MQ=255)
                                              tCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATc                         <  1:778659/61‑1 (MQ=255)
                                                aaCACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAAc              >  1:4739341/1‑70 (MQ=255)
                                                aaCACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAAc              <  1:4026721/70‑1 (MQ=255)
                                                aaCACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAAc              >  1:1494886/1‑70 (MQ=255)
                                                 acacGTATTTCCATGGGGTTATTCTTTAAATAtttttt                                             <  1:3841987/38‑1 (MQ=255)
                                                 acacGTATTTCCATGGGGTTATTCTTTAAATAtttttt                                             <  1:4362083/38‑1 (MQ=255)
                                                 acacGTATTTCCATGGGGTTATTCTTTAAATAtttttt                                             <  1:1475126/38‑1 (MQ=255)
                                                 acacGTATTTCCATGGGGTTATTCTTTAAATAtttttt                                             <  1:851370/38‑1 (MQ=255)
                                                 acacGTATTTCCATCTGGTTATTCTTTAAATAtttttt                                             <  1:2530193/38‑1 (MQ=37)
                                                  cacGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGaa                                 <  1:3813735/49‑1 (MQ=255)
                                                  cacGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACta            >  1:2687252/1‑70 (MQ=255)
                                                  cacGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACta            >  1:1208384/1‑70 (MQ=255)
                                                   acGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACtata          >  1:4693723/1‑71 (MQ=255)
                                                   acGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACtata          >  1:4688127/1‑71 (MQ=255)
                                                   acGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACtata          >  1:3580819/1‑71 (MQ=255)
                                                      tATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTatatat       >  1:3249143/1‑71 (MQ=255)
                                                      tATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTatatat       >  1:533993/1‑71 (MQ=255)
                                                      tATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTatatat       >  1:3437209/1‑71 (MQ=255)
                                                      tATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTatatat       >  1:2622/1‑71 (MQ=255)
                                                        tttCCATGGGGTTATTCTTTAAATATTTTTTATCGt                                        >  1:1116162/1‑36 (MQ=255)
                                                        tttCCATGGGGTTATTCTTTAAATATTTTTTATCGt                                        >  1:3841645/1‑36 (MQ=255)
                                                        tttCCATGGGGTTATTCTTTAAATATTTTTTATCGTTa                                      <  1:469201/38‑1 (MQ=255)
                                                        tttCCATGGGGTTATTCTTTAAATATTTTTTATCGTTa                                      <  1:2060940/38‑1 (MQ=255)
                                                        tttCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATAtct     >  1:2503832/1‑71 (MQ=255)
                                                        tttCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATAtc      <  1:821025/70‑1 (MQ=255)
                                                        tttCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATAtc      <  1:815087/70‑1 (MQ=255)
                                                          tCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATATctct   >  1:3985613/1‑71 (MQ=255)
                                                           ccATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACtatata        >  1:3528004/1‑65 (MQ=255)
                                                           ccATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACtatata        >  1:641448/1‑65 (MQ=255)
                                                           ccATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATATCTCTg  >  1:4491711/1‑71 (MQ=255)
                                                              tGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATATctct   <  1:1355478/67‑1 (MQ=255)
                                                                gggTTATTCTTTAAATATTTTTTATCGTTAACGaaa                                >  1:1617082/1‑36 (MQ=255)
                                                                gggTTATTCTTTAAATATTTTTTATCGTTAACGaaa                                >  1:97119/1‑36 (MQ=255)
                                                                |                                                                 
TACATAATTTAGTTCCAGAAAACAATCATTCGGAAAAATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATATCTCTG  >  Exported/1187476‑1187605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: