New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | = 42716 | 42 (0.710) | 4 (0.080) | 3/88 | NT | 10.0% | coding (859/1287 nt) | fixC | predicted oxidoreductase, FAD/NAD(P)‑binding domain |
? | Exported | = 42759 | 36 (0.710) | coding (902/1287 nt) | fixC | predicted oxidoreductase, FAD/NAD(P)‑binding domain |
GGCCGTTGCACCGCTGATCGCGGGCGGCAAGCTGGTGGAATATTCCGCTCACGTAGTGCCGGAAGCAGGCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/42643‑42716 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcaCCGGCAATCAATACGCCGTCACCAACCAACTCCGGCAGCATGTTG < Exported/42759‑42715 GGCCGTTGCACCGCTGATCGCGGGCGGCAAGCTGGTGGAATATTCCGCTCACGTAGTGCCGGAAGCAGGCA > 1:2269448/1‑71 CGTTGCACCGCTGATCGCGGGCGGCAAGCTGGTGGAATATTCCGCTCACGTAGTGCCGGAAGCAGGCATC > 1:835179/1‑70 GAATATTCCGCTCACGTAGTGCCGGAAGCAGGCATCACCGGCAATCAATACGCCGTCACCAACCAACTCCG > 1:663816/1‑71 GAATATTCCGCTCACGTAGTGCCGGAAGCAGGCATCACCGGCAATCAATACGCCGTCACCAACCAACTC > 1:1387386/1‑69 TATTCCGCTCACGTAGTGCCGGAAGCAGGCATCACCGGCAATCAATACGCCGTCACCAACCAACTCCGG > 1:403406/1‑69 ACGTAGTGCCGGAAGCAGGCATCACCGGCAATCAATACGCCGTCACCAACCAACTCCGGCAGCATGTTG < 1:1892087/69‑1 ACCGGCAATCAATACGCCGTCACCAACCAACTCCGGCAGCATGT < 1:369783/44‑1 ACCGGCAATCAATACGCCGTCACCAACCAACTCCGGCAGCATGT < 1:53370/44‑1 GGCCGTTGCACCGCTGATCGCGGGCGGCAAGCTGGTGGAATATTCCGCTCACGTAGTGCCGGAAGCAGGCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/42643‑42716 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcaCCGGCAATCAATACGCCGTCACCAACCAACTCCGGCAGCATGTTG < Exported/42759‑42715 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |