| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 152453 = | 111 (1.880) | 6 (0.120) | 4/90 | NT | 6.5% | coding (1255/1281 nt) | hemL | glutamate‑1‑semialdehyde aminotransferase |
| ? | Exported | 152488 = | 76 (1.460) | coding (1220/1281 nt) | hemL | glutamate‑1‑semialdehyde aminotransferase | |||||
GGGCTTTATGTCCGTGGCGCACAGCATGGAAGATATCAATAACACCATCGATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/152508‑152453‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgctgTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCATCATA > Exported/152488‑152556 GGGCTTTATGTCCGTGGCGCACAGCATGGAAGATATCAATAACACCATCGAT < 1:723809/52‑1 TATGTCCGTGGCGCACAGCATGGAAGATATCAATAACACCATCGATGCTG > 1:2185769/1‑50 TATGTCCGTGGCGCACAGCATGGAAGATATCAATAACACCATCGATGCTG > 1:2957293/1‑50 ACAGCATGGAAGATATCAATAACACCATCGATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGA > 1:3351454/1‑71 CAGCATGGAAGATATCAATAACACCATCGATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGAC > 1:2779381/1‑71 GCATGGAAGATATCAATAACACCATCGATGCTGTGCGCCACGGACATAAAGCCCGC < 1:239159/56‑1 ATGGAAGATATCAATAACACCATCGATGCTGTGCGCCACGGACATAAAGCCCGCTT > 1:2051800/1‑56 ATGGAAGATATCAATAACACCATCGATGCTGTGCGCCACGGACATAAAGCCCGCTT > 1:2928369/1‑56 ATGGAAGATATCAATAACACCATCGATGCTGTGCGCCACGGACATAAAGCCCGCTT > 1:3659732/1‑56 ATGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCAT > 1:57541/1‑71 TGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCATC < 1:3634321/71‑1 TGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGT > 1:1745279/1‑63 TGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGT > 1:2402075/1‑63 TGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGT > 1:305411/1‑63 TGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTG < 1:589129/45‑1 TGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTG < 1:1499803/45‑1 TGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTG < 1:936896/45‑1 TGCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTG < 1:2104737/45‑1 GCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCATCA > 1:1298447/1‑71 GCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCATC > 1:3287055/1‑70 GCTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCATC < 1:735112/70‑1 CTGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCATCA > 1:3465499/1‑70 TGTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCATCATA > 1:3554515/1‑71 GTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCC < 1:3659115/43‑1 GTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCC < 1:3350294/43‑1 GTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCC < 1:2725823/43‑1 GTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCC < 1:660770/43‑1 GGGCTTTATGTCCGTGGCGCACAGCATGGAAGATATCAATAACACCATCGATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/152508‑152453‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgctgTGCGCCACGGACATAAAGCCCGCTTCAAACGCTGACGGTGCCAGGTAAACACCTTCGTCCAGCATCATA > Exported/152488‑152556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |