| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 162556 = | 38 (0.640) | 6 (0.110) | 3/92 | NT | 11.7% | coding (365/387 nt) | yaeH | conserved hypothetical protein |
| ? | Exported | 162581 = | 56 (1.050) | coding (340/387 nt) | yaeH | conserved hypothetical protein | |||||
TAAGATCCTCGACGACTTACGTCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/162627‑162556‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatctTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAACTTCGCTGC > Exported/162581‑162649 TAAGATCCTCGACGACTTACGTCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATC < 1:2525808/71‑1 AAGATCCTCGACGACTTACGTCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATCT > 1:1512007/1‑71 AAGATCCTCGACGACTTACGTCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATCT > 1:3422500/1‑71 AAGATCCTCGACGACTTACGTCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATCT > 1:2975921/1‑71 AGATCCTCGACGACTTACGTCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATCT < 1:1179336/70‑1 AGATCCTCGACGACTTACGTCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATCT < 1:1954400/70‑1 TCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGA < 1:2218197/48‑1 TCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGA > 1:1221082/1‑38 TCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGA > 1:415714/1‑38 TAAGATCAGCGAGATTGAAGCCGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATC > 1:2741549/1‑71 GATCAGCGAGATTGAAGCCGATCTTATTGGTTACGACTGACTCCAGGTGACGT < 1:3421242/53‑1 GATCAGCGAGATTGAAGCCGATCTTATTGGTTACGACTGACTCCAGGT < 1:2267389/48‑1 GATCAGCGAGATTGAAGCCGATCTTATTGGTTACGACTGACTCCAGGT < 1:1563728/48‑1 GATCAGCGAGATTGAAGCCGATCTTATTGGTTACGACTGACTCCAGGT < 1:3576166/48‑1 GATCAGCGAGATTGAAGCCGATCTTATTGGTTACGACTGACTCCAGGT < 1:554113/48‑1 CTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAACTTCGCTGC > 1:61020/1‑71 CTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTA > 1:1416913/1‑49 TTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAACTTCGCTG < 1:2932832/69‑1 TTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAACTTCGCTG < 1:2041657/69‑1 TAAGATCCTCGACGACTTACGTCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/162627‑162556‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatctTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATCTTACGCTTAAGATCAACTTCGCTGC > Exported/162581‑162649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |